Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_O01
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac... 29 0.57
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 28 1.3
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 2.3
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 27 2.3
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 3.1
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 26 5.3
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 25 7.1
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 25 7.1
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 25 9.3
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 25 9.3
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 25 9.3
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 25 9.3
>SPBC216.01c ||SPBC713.13c|DNA damage response protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 836
Score = 29.1 bits (62), Expect = 0.57
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Frame = -3
Query: 319 PSINIPGSFLEEILSDPVQFFRTG*GVESELFHVRFNESILG*RRED---VVDEXXXXXX 149
PS ++ SF+ +D +Q+ +T ELF + NE R++D + +
Sbjct: 322 PSFSVLNSFIFFNQADIIQYLQTNEKFLHELFSIYVNEGEDDQRKQDGIFFIQQVCNIAK 381
Query: 148 XXXXXXATTLSHFLTRYNNVRSIKLKILHERNCKR--GHEIRVIQTRYRPA 2
+ L ++N ++++ + HE N R G +I V + PA
Sbjct: 382 GLQFQSCSALFATFVKFNLLKALDYAMSHENNSVRNAGSDILVSIIDHEPA 432
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 27.9 bits (59), Expect = 1.3
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Frame = +2
Query: 161 KRLVDNIFPASPQDGLVKSNMEKLTFY-SLSSPEKLDRIGEYLFQKASRDIYRRRHGFVI 337
+ ++D + + + ++ S KLT Y S +P+ +G F +
Sbjct: 1354 QEIIDKFYDGNTNEQIISS---KLTVYASRYAPDVFLNLGSLFFPFIFFGKHSSSISING 1410
Query: 338 IAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPS 517
+ +A D+L A ++NL+ E + ++QK L T ++ A + + F N T
Sbjct: 1411 VLSKAWDELSSA--GSSVNLYSEEIILLIQKNLIVTKWDVKRPAAAALLEFVNTSRLT-- 1466
Query: 518 YHRRYDFFV 544
+R+ D +V
Sbjct: 1467 -YRQNDIYV 1474
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -1
Query: 282 YSPILSSFSGLDKE*KVSFSMLDLTSPSWGD 190
+SPIL S + L+++ + SFS +++SPS D
Sbjct: 51 HSPILESPTSLNRQHRNSFSFNNVSSPSLED 81
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 224 EKLTFYSLSSPEKLDRIGEYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFV 403
EKL + P LD Y+F A+ ++ + + ++ + Q++ + H +NL +
Sbjct: 174 EKLKLWKQRRPTSLD----YIFMSAASKVFAAVNMYPLLVIRTRLQVMRSPHRSIMNLVL 229
Query: 404 ESF-LKMVQKLLESTDPQLQILATQSFVRFANIEE 505
+++ L+ + + P L + Q+ + F E+
Sbjct: 230 QTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYEQ 264
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 284 LFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVESFLKMV 424
LF S+D+Y + G + + M+ QL + LFV+ K++
Sbjct: 47 LFMLQSKDVYEQFFGALTLQMKINTQLETLSDKDLVQLFVQLLQKLL 93
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 25.8 bits (54), Expect = 5.3
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Frame = -3
Query: 403 HEEIEGLRVARDQQLVHRLHRYYYESVSPSINIPGSFLEEILSDPV---------QFFRT 251
H+ + G+ L L YE++S GS L ++ S +FF T
Sbjct: 354 HQRLSGMAYIYSAALPASLAVAAYEAISILSRDGGSMLNDLRSKSALFHAKLSRNKFFET 413
Query: 250 G*GVESELFHVRFNE 206
+ES + H+RF +
Sbjct: 414 SSDIESPIIHLRFKD 428
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 128 CGCCSALRPRYKRLVDNIFPASPQDGLVKSNME 226
CG C L P Y+ L +F P +VK N +
Sbjct: 170 CGYCKRLAPTYETL-GKVFKNEPNVEIVKINAD 201
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 341 AMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQS 478
A E + +L A T+ + + + ++++L + DP +Q ATQ+
Sbjct: 541 AFEVLKPVLAAGGDSTV--YEQQIIPLLEQLTKDNDPDVQYFATQA 584
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 25.0 bits (52), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 LRPRYKRLVDN-IFPASPQDGLVKSNMEKLTFYSLSS 253
L R + LV I PASP+D KS + K +LSS
Sbjct: 80 LAKRNQNLVPTVIIPASPRDNASKSVVSKKEVVNLSS 116
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 9.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -3
Query: 361 LVHRLHRYYYESVSPSINIPG 299
++H H +E V P +++PG
Sbjct: 875 IIHPTHSSVFEQVEPDVDLPG 895
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 417 KWFRNYWSPLTRSCRSSPHRV 479
KW R W+P S SSP V
Sbjct: 163 KWSRKSWNPDVNSTTSSPSEV 183
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 128 CGCCSALRPRYKRLVDNIFPASP 196
CG C L P Y++L N+ P
Sbjct: 60 CGYCKKLVPTYQKLASNLHSLLP 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,366,844
Number of Sequences: 5004
Number of extensions: 43984
Number of successful extensions: 135
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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