Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_O01
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 61 8e-10
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239... 55 6e-08
07_01_0748 - 5735420-5735593,5735735-5735953,5736353-5736532,573... 52 3e-07
03_02_0757 - 10940993-10941112,10941218-10941418,10941661-109417... 46 3e-05
02_01_0418 - 3059575-3061279,3061915-3061973,3064270-3064353,306... 29 4.2
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 28 5.5
06_03_1069 - 27345207-27345488,27345746-27346078,27346252-273470... 28 5.5
06_01_0263 + 1936927-1936936,1937031-1937305,1937727-1938079,193... 28 5.5
07_01_0041 - 332393-333772 28 7.3
04_03_0091 - 11043023-11043090,11043458-11043566,11044431-110445... 28 7.3
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 28 7.3
12_01_0565 - 4575521-4575724 27 9.7
12_01_0072 + 609254-609722,610355-610421,610652-610745,610984-61... 27 9.7
11_03_0126 + 10371536-10371596,10372467-10372544,10373968-103741... 27 9.7
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 60.9 bits (141), Expect = 8e-10
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Frame = +2
Query: 95 VISRQKM--AQGCCGCCSALRPR-------YKRLVDNIFPASPQDGLVKSNMEKLTFYSL 247
V+SR+ + + C C +LR R YK+L+ IFP S + + KL Y
Sbjct: 5 VVSREVLPACERLCFLCPSLRTRSRHPVKRYKKLLSEIFPKSQDEEPNDRKIGKLCEYIS 64
Query: 248 SSPEKLDRIGEYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQ 427
+P ++ +I YL QK +++ G V + M +++ +C Q L LF S L +V+
Sbjct: 65 RNPLRVPKITVYLEQKFYKELRVEHFGSVKVVMAIYRKVICSCQEQ-LPLFANSLLNIVE 123
Query: 428 KLLE-STDPQLQILATQSFVRFANIEEDTPSYHRRYDFFVSKFSAMCHSNHGEPGPRDRI 604
LLE + L+ +A ++ F N + D+ +Y + + K + E G +++I
Sbjct: 124 ALLEQNRQDDLRTIACRTLFYFVNNQVDS-TYMFNLESQIPKLCQLAQ----EMGEKEKI 178
Query: 605 RLXGIQGLQGV 637
+ GLQ +
Sbjct: 179 SIVHAAGLQAL 189
>02_01_0336 +
2397648-2397812,2398367-2398441,2398860-2398975,
2399155-2399269,2399360-2399488,2399809-2399856,
2400369-2400448,2400628-2400824,2400916-2401202,
2401281-2401307,2401353-2401538,2401633-2402094,
2402201-2402350,2402612-2402687,2402851-2402978,
2403244-2403435,2403559-2403690,2403767-2403889,
2404128-2404346,2404518-2404679
Length = 1022
Score = 54.8 bits (126), Expect = 6e-08
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Frame = +2
Query: 95 VISRQKMAQ--GCCGCCSALRPR-------YKRLVDNIFPASPQDGLVKSNMEKLTFYSL 247
V+SR+ + G C C LR R YK+++ +IFPA+ + + + KL Y
Sbjct: 13 VVSRKVLPACGGLCYFCPGLRARSRQPVKRYKKIIADIFPATQDEEPNERRIGKLCEYVA 72
Query: 248 SSPEKLDRIGEYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQ 427
+ ++ +I YL Q+ +++ ++GFV + + +LLV+C Q + L S L ++
Sbjct: 73 RNHHRVPKITAYLEQRCYKELRNEQYGFVKVVVLIYRKLLVSCKKQ-MPLLASSALSIIC 131
Query: 428 KLLEST-DPQLQILATQSFVRFANIEEDTPSYHRRYDFFVSKFSAMCHSNHGEPGPRDRI 604
LL+ T ++I+ ++ F + + +Y + V K + E + +
Sbjct: 132 TLLDQTRRDDMRIIGCETLFDF-TVSQVDGTYQFNLEELVPKLCELAQIVKAEE-KDNML 189
Query: 605 RLXGIQGLQGVI 640
R +Q L +I
Sbjct: 190 RASTLQALSAMI 201
>07_01_0748 -
5735420-5735593,5735735-5735953,5736353-5736532,
5736602-5736739,5736852-5737052,5737859-5737986,
5738114-5738189,5738354-5738503,5738594-5739115,
5739208-5739357,5739559-5739807,5740249-5740440,
5740890-5740937,5741589-5741717,5741821-5741935,
5742044-5742159,5742341-5742415,5742562-5742696
Length = 998
Score = 52.4 bits (120), Expect = 3e-07
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Frame = +2
Query: 95 VISRQKMAQGC---CGCCSALRPR-------YKRLVDNIFPASPQDGLVKSNMEKLTFYS 244
VISR K+ C C C LR R YK ++ IFP + + + + KL Y
Sbjct: 3 VISR-KVLPACGSLCYFCPGLRARSRQPVKRYKSILAEIFPKTQDEEPNERRIGKLCEYC 61
Query: 245 LSSPEKLDRIGEYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVESFLKMV 424
+P ++ +I L Q+ +++ ++GF + M +LLV+C Q + LF S L +V
Sbjct: 62 SRNPLRVPKITVSLEQRIYKELRSEQYGFAKVVMLIYRRLLVSCKEQ-MPLFASSLLSIV 120
Query: 425 QKLL-ESTDPQLQILATQSFVRFANIEEDTPSYHRRYDFFVSKFSAMCHSNHGEPGPRDR 601
LL + ++I+ ++ FA + + +Y + V + + GE
Sbjct: 121 HTLLDQKRQDDMRIIGCETLFDFA-VNQVDGTYQFNLEGLVPRLCEL-SQEVGEDEQTIA 178
Query: 602 IRLXGIQGLQGVI 640
+R +Q L +I
Sbjct: 179 LRAAALQALSAMI 191
>03_02_0757 -
10940993-10941112,10941218-10941418,10941661-10941795,
10941948-10942088,10942214-10942405,10942624-10942748,
10942828-10942903,10943024-10943173,10943467-10943856,
10944078-10944227,10944430-10944710,10945034-10945230,
10945836-10946035,10946422-10946469,10946566-10946688,
10946771-10946882,10946988-10947103,10947526-10947660
Length = 963
Score = 46.0 bits (104), Expect = 3e-05
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 7/181 (3%)
Frame = +2
Query: 119 QGCCGCCSALRP-------RYKRLVDNIFPASPQDGLVKSNMEKLTFYSLSSPEKLDRIG 277
+ C CC ALRP RYK+L+ IFP +P I
Sbjct: 13 ESMCVCCPALRPSSRRPVKRYKKLLAEIFPKTP-------------------------IA 47
Query: 278 EYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQL 457
++L Q++ +++ F+ I EA +LL C Q + F S + ++ +LLES +
Sbjct: 48 KFLEQRSHKELRSAHVNFIKIITEAYSKLLFICKEQ-MAYFAISLVNVLTELLESKQENI 106
Query: 458 QILATQSFVRFANIEEDTPSYHRRYDFFVSKFSAMCHSNHGEPGPRDRIRLXGIQGLQGV 637
IL Q+ +F + D +Y R + V K +C + + +R +Q L +
Sbjct: 107 HILGCQTLAKFIYSQVDN-TYARNIESLVRK---VCVLSRQQGVEHSLLRAASLQCLSAM 162
Query: 638 I 640
I
Sbjct: 163 I 163
>02_01_0418 -
3059575-3061279,3061915-3061973,3064270-3064353,
3064395-3064559
Length = 670
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 507 SSSMFANRTKLCVARICSCGSVD 439
SSS FA KLC + + CGSV+
Sbjct: 604 SSSSFAGNPKLCGSMLAPCGSVE 626
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 515 SYHRRYDFFVSKFSAMCHSNHGEP 586
S+ ++YD F++ F ++ H+ GEP
Sbjct: 81 SFEQQYDRFINSFRSLEHNTRGEP 104
>06_03_1069 -
27345207-27345488,27345746-27346078,27346252-27347041,
27347153-27347351,27347522-27347667,27347823-27348094,
27348161-27348262,27348351-27348470,27348576-27348729,
27348986-27349114,27349554-27349900
Length = 957
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 48 LQFLSWRIFNFIDLTLLYLVRKW 116
L F SW + NF D TLLYL ++W
Sbjct: 352 LSFASW-LPNFYDETLLYLEQEW 373
>06_01_0263 +
1936927-1936936,1937031-1937305,1937727-1938079,
1938598-1938715,1938823-1938946,1939389-1939608,
1939948-1940017,1940083-1940136,1940536-1940604,
1941138-1941194,1941503-1941575,1942037-1942080,
1942629-1942751,1943092-1943321,1943552-1943660,
1944196-1944339,1944443-1944604,1944921-1945197,
1945326-1945486,1945591-1945782,1946789-1946971,
1946986-1947063,1947187-1947366,1947476-1947562
Length = 1130
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 158 YKRLVDNIFPASPQDGLVKSNMEKL-TFYSL---SSPEKLDRIGE 280
++RLV P LV+SN + L TFYS SS E + RIGE
Sbjct: 251 FQRLVQEDSPLCSSITLVRSNKKLLDTFYSFFSESSSEIIQRIGE 295
>07_01_0041 - 332393-333772
Length = 459
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 448 VSGLQ*FLNHFEEAFHEEIEGLRVARDQQLVHRLHRYYYESVSPSINIPGSFLEEI 281
V G++ L AFH+ EG + R Q+ + L + E + +PG +++
Sbjct: 11 VEGMEQKLEKLMSAFHDHQEGNKAVRHQKELEELFSFLREHEAAFSQLPGDKKDDL 66
>04_03_0091 -
11043023-11043090,11043458-11043566,11044431-11044577,
11044678-11044776,11044857-11044982,11045448-11045582,
11046391-11046468,11046553-11046678,11046828-11046968
Length = 342
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -3
Query: 418 FEEAFHEEIEGLRVARDQQLVHRLHRYYYESVSPSINIPGSFLEEILSDPVQFFRTG*GV 239
F E +E A D +L HR+H + + + + G +E++ D + G
Sbjct: 69 FSEMDERVLESQACADDNEL-HRMHTWLPDGWAIEVRAGGKKMEKMYKDRKRIPEITGGF 127
Query: 238 ESELFHVRFNES 203
E H R N+S
Sbjct: 128 EQNRDHFRHNDS 139
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 39 CPLLQFL--SWRIFNFIDLTLLYLVRKWLKVVAAAAL 143
C +QF+ SW +F+ LT +Y + WL+ AA+
Sbjct: 554 CLAIQFMIKSWLLFDRQQLTTIYGQQPWLQTAPGAAI 590
>12_01_0565 - 4575521-4575724
Length = 67
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 349 GDGPAAGRVPLADPQSLRGKLP-QNGSE 429
GDG G+V + P++ RG+LP ++G E
Sbjct: 14 GDGSDEGKVTMYPPRAARGRLPRRHGGE 41
>12_01_0072 +
609254-609722,610355-610421,610652-610745,610984-611127
Length = 257
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 4 PADIVSESLVFRVLFYNFFHGEFLILSISRCY 99
PA + ++ L RVL FH L++ + RCY
Sbjct: 152 PATLATKPLRLRVL--GLFHPRLLVIDLKRCY 181
>11_03_0126 +
10371536-10371596,10372467-10372544,10373968-10374127,
10374286-10374610,10374708-10374860,10374985-10375236,
10375356-10375445,10375543-10375621,10375712-10375818,
10375921-10376048,10376329-10376419
Length = 507
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = -3
Query: 412 EAFHEEIEGLRVARDQQLVHRLHRYYYESVSPSIN---IPGSFLEEILSDPVQFFRTG*G 242
E E GLRV + L + Y ++P N PGS I+ + QFFRT
Sbjct: 28 ERITEGTVGLRVNHVKYDGGWLAHWVYRWINPPCNGRLPPGSMGFPIVGETFQFFRTSPS 87
Query: 241 VESELFHVR 215
++ +++ R
Sbjct: 88 IDMPIYYKR 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,072,631
Number of Sequences: 37544
Number of extensions: 308213
Number of successful extensions: 920
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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