Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_O01
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 30 1.2
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 30 1.6
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 30 1.6
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 30 1.6
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 30 1.6
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 28 6.5
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 28 6.5
U41105-11|AAA82405.2| 247|Caenorhabditis elegans Hypothetical p... 27 8.6
>U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical
protein C32D5.3 protein.
Length = 859
Score = 199 bits (485), Expect = 2e-51
Identities = 99/176 (56%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Frame = +2
Query: 122 GCCGCCSALRPRYKRLVDNIFPASPQDGLVKSNMEKLTFYSLSSPEKLDRIGEYLFQKAS 301
G C CC+ +PRY+RLVD+I+P + DGL+ SNM+KLTFY++S PEKL+RIGEYL +
Sbjct: 3 GLC-CCTPCKPRYRRLVDSIYPRAVTDGLLYSNMQKLTFYAISHPEKLERIGEYLVMRMV 61
Query: 302 RDIYRRRHGFVIIAMEAMDQLLVACHSQ-TLNLFVESFLKMVQKLLESTDPQLQILATQS 478
RD+ R+R V IA+EAMDQLL ACHS +L F E+ L+MVQ+LLES + +++ LAT S
Sbjct: 62 RDLSRQRPVQVKIAVEAMDQLLQACHSSPSLPQFSENHLRMVQRLLESNNAKMEQLATDS 121
Query: 479 FVRFANIEEDTPSYHRRYDFFVSKFSAMCHSN-HGEPGPRDRI-RLXGIQGLQGVI 640
FV F+NIEE +PSYHR+YDFF+ KFS MCH+N G R+ R G++GL+GV+
Sbjct: 122 FVTFSNIEESSPSYHRQYDFFIDKFSQMCHANPQAAYGDDFRLARCAGLRGLRGVV 177
>Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 236 FYSLSSPEKLDRIGEYLFQKASRDIYRRRHGFVIIAMEAMDQLLVACHSQTLNLFVES-- 409
F S S E +RI E R + +R V I E +L S+ L+L +
Sbjct: 82 FLSTSRREISERISENEDGFDFRTVTTQRTEHVYIRTEDDQFILGVSISKQLSLVSDYPL 141
Query: 410 FLKMVQKLLESTDPQLQIL--ATQSFVRFANIEEDTPSYHRRYDFFVSKF 553
F ++ +L ++ SF++ N+ +D P + R DFF SK+
Sbjct: 142 FQPAIRSILSDAYKMFRMFFGTFSSFIK--NVPDDIPKFKERLDFFFSKY 189
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 329 FVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQS 478
F++ A + MDQ++ +CHS LNL ++ + +L T L ++ TQ+
Sbjct: 68 FLLKACKFMDQVVKSCHSPRLNL--KNSPPFILDILPDTYTHLMLIFTQN 115
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 329 FVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQS 478
F++ A + MDQ++ +CHS LNL ++ + +L T L ++ TQ+
Sbjct: 68 FLLKACKFMDQVVKSCHSPRLNL--KNSPPFILDILPDTYTHLMLIFTQN 115
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 329 FVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQS 478
F++ A + MDQ++ +CHS LNL ++ + +L T L ++ TQ+
Sbjct: 51 FLLKACKFMDQVVKSCHSPRLNL--KNSPPFILDILPDTYTHLMLIFTQN 98
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 329 FVIIAMEAMDQLLVACHSQTLNLFVESFLKMVQKLLESTDPQLQILATQS 478
F++ A + MDQ++ +CHS LNL ++ + +L T L ++ TQ+
Sbjct: 51 FLLKACKFMDQVVKSCHSPRLNL--KNSPPFILDILPDTYTHLMLIFTQN 98
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 287 FQKASRDIYRRRHGFVIIAMEAMDQ--LLVACHSQTLNL 397
F K +RD+ F +A+E +D+ +L+ACH Q L+L
Sbjct: 126 FSKNARDVAEL---FYTVALENVDKVPILIACHKQDLSL 161
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 188 ASPQDGLVKSNMEKLTFYSLSSPEKLDRIGEYLFQKASRDIYRRR 322
A QD +SN +L + + L+R+GE ++Q +DI R R
Sbjct: 135 AGVQDCFSRSNEYQLNDSAKYFLDDLERLGEAIYQPTEQDILRTR 179
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 188 ASPQDGLVKSNMEKLTFYSLSSPEKLDRIGEYLFQKASRDIYRRR 322
A QD +SN +L + + L+R+GE ++Q +DI R R
Sbjct: 135 AGVQDCFSRSNEYQLNDSAKYFLDDLERLGEAIYQPTEQDILRTR 179
>U41105-11|AAA82405.2| 247|Caenorhabditis elegans Hypothetical
protein T02G5.2 protein.
Length = 247
Score = 27.5 bits (58), Expect = 8.6
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +2
Query: 146 LRPRYKRLVDNIFPASP--QDGLVKSNMEKLTFYSLSS--PEKLDRIG-EYLFQKASRDI 310
L R+K + NIF + QDGL+ N E++ FY+L+S E D+ YL +RD
Sbjct: 117 LSKRFKSTLMNIFDSFDVDQDGLL--NKEEMNFYTLASGDSELTDQDWFVYLNSFDNRDG 174
Query: 311 YRRRHGFV-IIAMEAMD 358
GF+ + MEA D
Sbjct: 175 GLTMGGFIKVHEMEAFD 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,097,127
Number of Sequences: 27780
Number of extensions: 244834
Number of successful extensions: 777
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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