Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_N19
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.93 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.93 
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   2.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   3.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   3.8  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   6.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 240 GLGVNTDVDLVKIIEAGRYISNFLG 314
           G+  + +VD +  + +G+YIS+F+G
Sbjct: 250 GMKESVEVDQLSWLGSGQYISDFVG 274


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 240 GLGVNTDVDLVKIIEAGRYISNFLG 314
           G+  + +VD +  + +G+YIS+F+G
Sbjct: 288 GMKESVEVDQLSWLGSGQYISDFVG 312


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 341 PVNFGFGRFSKEVGNVS 291
           P  FG+G +  E GNVS
Sbjct: 32  PPLFGWGSYGPEAGNVS 48


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 169 SADARMHAARAVTLPPKT*SISCMAWES 252
           SA   M+ ++++T PPK  + S   WE+
Sbjct: 300 SALQEMNKSKSITEPPKNCADSGSIWET 327


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 316 FPRKLEMYRPASIIFTRSTSVLT 248
           F   L MY PASI+  ++ S  T
Sbjct: 360 FKETLRMYPPASILMRKAISDYT 382


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 154 LPSPDSADARMHAARAVTLPPK 219
           +PSPD  D  +     + LPP+
Sbjct: 446 VPSPDPLDLAIPVRETLILPPR 467


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 472 YLITIIECLFLSLNRYCNINYLY 404
           YL+     +F +L  Y  +NY Y
Sbjct: 307 YLVMCFVFVFAALLEYAAVNYTY 329


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 112 LESPCPYVSWK*RASCSGFATV 47
           L  P P  SW    +CSG  +V
Sbjct: 104 LLEPYPNWSWAKNQNCSGITSV 125


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 147 VDSSISGLGGCPYARGASGNLA 212
           VD++ +G   C Y    +GN+A
Sbjct: 138 VDAATAGDKSCRYTASLAGNVA 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,034
Number of Sequences: 438
Number of extensions: 3437
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)