Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_N16
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 326 1e-89
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 326 1e-89
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 322 2e-88
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 313 1e-85
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 236 1e-62
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 232 2e-61
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 188 4e-48
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 184 5e-47
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.40
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 30 2.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.8
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 6.5
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 8.6
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 8.6
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 326 bits (800), Expect = 1e-89
Identities = 148/198 (74%), Positives = 172/198 (86%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 363
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 364 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 543
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 544 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 723
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 724 QRVHTVXVSLQHSEKITL 777
RVHTV +S QHS I+L
Sbjct: 186 LRVHTVVISTQHSPDISL 203
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 326 bits (800), Expect = 1e-89
Identities = 148/198 (74%), Positives = 172/198 (86%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 363
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 364 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 543
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 544 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 723
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 724 QRVHTVXVSLQHSEKITL 777
RVHTV +S QHS I+L
Sbjct: 186 LRVHTVVISTQHSPDISL 203
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 322 bits (790), Expect = 2e-88
Identities = 148/198 (74%), Positives = 170/198 (85%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 363
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 364 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 543
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 544 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 723
MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVP 185
Query: 724 QRVHTVXVSLQHSEKITL 777
RVHTV +S QHS I+L
Sbjct: 186 LRVHTVVISTQHSPDISL 203
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 313 bits (768), Expect = 1e-85
Identities = 143/200 (71%), Positives = 170/200 (85%)
Frame = +1
Query: 178 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 357
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 358 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 537
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 538 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 717
G+MFGYATDETEE MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGAT 182
Query: 718 VPQRVHTVXVSLQHSEKITL 777
+P RVHTV VS QHS +TL
Sbjct: 183 IPLRVHTVVVSTQHSPDVTL 202
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 236 bits (578), Expect = 1e-62
Identities = 107/152 (70%), Positives = 129/152 (84%)
Frame = +1
Query: 322 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 501
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 502 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 681
+++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 682 VTCEYVFAGGATVPQRVHTVXVSLQHSEKITL 777
VT EY GGA VP RVHTV +S QHS I+L
Sbjct: 121 VTIEYASEGGACVPLRVHTVVISTQHSPDISL 152
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 232 bits (568), Expect = 2e-61
Identities = 107/152 (70%), Positives = 127/152 (83%)
Frame = +1
Query: 322 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 501
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 502 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 681
+++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120
Query: 682 VTCEYVFAGGATVPQRVHTVXVSLQHSEKITL 777
VT EY GGA VP RVHTV +S QHS I+L
Sbjct: 121 VTIEYSSEGGACVPLRVHTVVISTQHSPDISL 152
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 188 bits (458), Expect = 4e-48
Identities = 84/125 (67%), Positives = 103/125 (82%)
Frame = +1
Query: 403 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 582
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 583 PLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXVSLQHS 762
PLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTV +S QHS
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHS 139
Query: 763 EKITL 777
I+L
Sbjct: 140 PDISL 144
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 184 bits (449), Expect = 5e-47
Identities = 84/130 (64%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Frame = +1
Query: 397 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 567
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 568 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXV 747
TEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTV +
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVI 152
Query: 748 SLQHSEKITL 777
S QHS I+L
Sbjct: 153 STQHSPDISL 162
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 363
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 364 DYQKVVRETVKHIGYDDSSKGFDYKT 441
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 149 bits (360), Expect = 3e-36
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 363
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 364 DYQKVVRETVKHIGYDDSSKG 426
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 362 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 529
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 530 ETRA*CSVMQQMRQKNAC 583
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 300
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 184 FLFTSESVGEGHPDKMCDQ 240
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 250 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 390
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 250 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 390
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 250 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 390
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 677 HRLLANMYLLVVQQSHREFILXSC 748
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 406 YDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE-TEECM 582
+DD+S+ + T + DQQ N + ++GA GL +++ T++
Sbjct: 225 HDDNSQPIEILTRILSKTSDQQWENFIGLLETIEKSTDIGASISGLRVSCSSNVLTKDSE 284
Query: 583 PLTVVLAHKLNQKIAELRRN 642
T V+ KLN++ E RN
Sbjct: 285 TQTDVVQRKLNKERREPSRN 304
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 304 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 483
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 484 AAGV 495
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 350 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 442
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 423 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 301
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 423 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 301
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,256
Number of Sequences: 27780
Number of extensions: 463804
Number of successful extensions: 1289
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -