Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_N13
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical pr... 343 9e-95
Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical pr... 340 9e-94
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 179 2e-45
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 28 6.8
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 28 6.8
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 28 6.8
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 28 6.8
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical
protein T21B10.2c protein.
Length = 465
Score = 343 bits (843), Expect = 9e-95
Identities = 168/246 (68%), Positives = 194/246 (78%)
Frame = +2
Query: 68 KSXXSVLKMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDN 247
KS S +M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD
Sbjct: 24 KSNLSGQRMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDG 83
Query: 248 IKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAIL 427
K+ + GKGVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAIL
Sbjct: 84 DKAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAIL 143
Query: 428 GVSLXXXXXXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFP 607
GVSL +PLYK++A+LAG +VLPVPAFNVINGGSHAGNKLAMQEFMI P
Sbjct: 144 GVSLAVAKAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILP 203
Query: 608 TGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIX 787
GAS+F+EAMRMGSEVYHHLK IK+++GLD+TAVGDEGGFAPNIQ+NK+ L L+ AI
Sbjct: 204 VGASSFAEAMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQDNKEGLDLLNTAID 263
Query: 788 KAGYAG 805
KAGY G
Sbjct: 264 KAGYTG 269
>Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical
protein T21B10.2a protein.
Length = 434
Score = 340 bits (835), Expect = 9e-94
Identities = 165/238 (69%), Positives = 190/238 (79%)
Frame = +2
Query: 92 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 271
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 272 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 451
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 452 XXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSE 631
+PLYK++A+LAG +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS+F+E
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180
Query: 632 AMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGYAG 805
AMRMGSEVYHHLK IK+++GLD+TAVGDEGGFAPNIQ+NK+ L L+ AI KAGY G
Sbjct: 181 AMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQDNKEGLDLLNTAIDKAGYTG 238
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 179 bits (436), Expect = 2e-45
Identities = 90/143 (62%), Positives = 105/143 (73%)
Frame = +2
Query: 92 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 271
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 272 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 451
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 452 XXXXXXNVPLYKHLADLAGNNDI 520
+PLYK++A+LAG I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 702 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 553
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 702 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 553
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 702 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 553
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 194 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 242
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 702 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 553
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = -1
Query: 750 LFCMFGA-KPPSSPTAVESNPNFSLM-----IFFKWWYTSEPILMASLKVDAPV 607
+FCM KPPS T+ S+ + + I +KW + EP ++K DA +
Sbjct: 822 VFCMLAVTKPPSRMTSSSSSTSSTYAYSTAEIEYKWCTSKEPNCSTAVKADANI 875
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -1
Query: 204 PEGTAARNKPSSVTRSTSTVGLPRESKI*RALIDFITIFNTEXXDLXKLSVILI*QNCTL 25
P G++A P S++RST P E ++ + + ++I+ T DL L + Q+ T+
Sbjct: 19 PSGSSAAIFPPSISRSTQRRPEPLEDQLLMNMQN-VSIYTTNDLDLASLGI----QSVTM 73
Query: 24 QXKVWR 7
W+
Sbjct: 74 TGNPWQ 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,665,022
Number of Sequences: 27780
Number of extensions: 359209
Number of successful extensions: 1030
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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