Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_N09
         (463 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110478-12|CAM33509.1|  108|Caenorhabditis elegans Hypothetical...    29   2.1  
AL110478-9|CAB54343.2|  113|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U64843-13|AAF98228.1|  355|Caenorhabditis elegans Hypothetical p...    27   4.9  
U39999-2|AAK93856.1|  296|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine r...    27   8.6  

>AL110478-12|CAM33509.1|  108|Caenorhabditis elegans Hypothetical
           protein Y26D4A.17 protein.
          Length = 108

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 193 FNKLNAQFINIIVFKHSYCIFLSFYSCDCFYSIVIFH*LLFFEYI 327
           F K+   F  I  F   Y  FL F+  + F  I+  + + FFEYI
Sbjct: 39  FEKVKKIFDKINQFYILYFSFLRFHELNHFPLIICIYLIFFFEYI 83


>AL110478-9|CAB54343.2|  113|Caenorhabditis elegans Hypothetical
           protein Y26D4A.5 protein.
          Length = 113

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 193 FNKLNAQFINIIVFKHSYCIFLSFYSCDCFYSIVIFH*LLFFEYI 327
           F K+   F  I  F   Y  FL F+  + F  I+  + + FFEYI
Sbjct: 44  FEKVKKIFDKINQFYILYFSFLRFHELNHFPLIICIYLIFFFEYI 88


>Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical
           protein R04D3.12 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 223 IIVFKHSYCIFLSFYSCDCFYSIV 294
           I ++ + YC F   + C+CFY I+
Sbjct: 76  IEIWTYGYCRFFEPWICNCFYQIM 99


>U64843-13|AAF98228.1|  355|Caenorhabditis elegans Hypothetical
           protein K06C4.8 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 157 YIACCSFSQLSVF--NKLNAQFINIIVFKHSYCIFLSFYSCDCFYSIVIF 300
           +  C S   +++F  N +  QF+   +  H   + L FYS   F+  +IF
Sbjct: 257 HFLCTSVKFINLFSHNYVQFQFVIFKIIHHISNVLLVFYSASTFFIYLIF 306


>U39999-2|AAK93856.1|  296|Caenorhabditis elegans Hypothetical
           protein F41G3.6 protein.
          Length = 296

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 154 RYIACCSFSQLSVFNKLNAQFINIIVFKHS 243
           RY++ CS  QLS+  + N  F  + VF  S
Sbjct: 136 RYLSQCSLDQLSIDERANVLFAILRVFSDS 165


>AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein19 protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 214 FINIIVFKHSYCIFLSFYSCDCFYSIVIFH*LLFFEYIFIVDVCRYFNK 360
           F  II  K   CI +++     F ++V F+ +LF  Y+++    R  +K
Sbjct: 14  FGKIIGVKCDNCILINYIFISVFATLVAFNLVLFTLYVYVFKTNRERDK 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,204,191
Number of Sequences: 27780
Number of extensions: 121978
Number of successful extensions: 356
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)