Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_N01
         (485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EB204C Cluster: UPI0000EB204C related cluster; n...    35   0.85 
UniRef50_Q40JT4 Cluster: Putative uncharacterized protein; n=3; ...    35   1.1  
UniRef50_A7LTX5 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_P37784 Cluster: O-antigen polymerase; n=2; Shigella fle...    32   7.9  

>UniRef50_UPI0000EB204C Cluster: UPI0000EB204C related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB204C UniRef100
           entry - Canis familiaris
          Length = 599

 Score = 35.1 bits (77), Expect = 0.85
 Identities = 12/59 (20%), Positives = 36/59 (61%)
 Frame = +3

Query: 105 YIRSTVILLSNCILCIHVVVIKTDMMSCLYCQ*KILYLIVFCYSVYLVVTKYIVDKHCK 281
           ++R +++L  +C +C+++  +  D+ S ++C+ ++  +      +++ V  +++ KHCK
Sbjct: 143 WVRGSLVLFGSCTICLNIFRVGYDV-SHIHCKSQLELIFPVIEMIFIGVQTWVLWKHCK 200


>UniRef50_Q40JT4 Cluster: Putative uncharacterized protein; n=3;
           canis group|Rep: Putative uncharacterized protein -
           Ehrlichia chaffeensis str. Sapulpa
          Length = 556

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +3

Query: 105 YIRSTVILLSNCILCIHVVVIKTDMMSC----LYCQ*KILYLIVFCYSVYLVVTKYIVDK 272
           + R T  L+   +   H+V +   ++ C    LYC   + YL++F   +YL+  K    K
Sbjct: 327 WTRITTFLVLAFVCLAHMVALACHLLKCDKAALYCS-MLSYLVIFAEGIYLLSLKTTTSK 385

Query: 273 HCKYFCV 293
            C   C+
Sbjct: 386 ICAAVCM 392


>UniRef50_A7LTX5 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 370

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -1

Query: 305 LVILYTKIFTMFIYNIFGNNEIYTIAKYY*IQYLLLAIQTRHHISLNYNXMNT*NTV 135
           + IL+T     F++N+FG   I      + IQYL       +HI++ +N  NT +T+
Sbjct: 193 IYILFTLNINEFVFNLFGIMAI-VFTVLFSIQYLRYENPFSNHINMIHNAKNTESTI 248


>UniRef50_P37784 Cluster: O-antigen polymerase; n=2; Shigella
           flexneri|Rep: O-antigen polymerase - Shigella flexneri
          Length = 382

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = -2

Query: 310 ND*LYYTQKYLQCLSTIYLVTTRYTL 233
           ND L+  Q YL  LS IYL T RYTL
Sbjct: 86  NDILFDVQPYLFMLSLIYLFTLRYTL 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,352,956
Number of Sequences: 1657284
Number of extensions: 7019326
Number of successful extensions: 13400
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13393
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)