Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_N01
         (485 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical ...    29   2.4  
AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical...    27   7.2  
Z74030-13|CAA98445.2|  336|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 357 CVAFLITNFPLFNS*LMTSYTIHKNIYNVYLQYIW 253
           C+ FLI  F  FN     ++ I   I  V+++Y W
Sbjct: 345 CICFLILTFMTFNGYTGLAFLIVNLIGTVFIEYTW 379


>AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 357 CVAFLITNFPLFNS*LMTSYTIHKNIYNVYLQYIW 253
           C+ FLI  F  FN     ++ I   I  V+++Y W
Sbjct: 345 CICFLILTFMTFNGYTGLAFLIVNLIGTVFIEYTW 379


>AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.6 protein.
          Length = 271

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 299 ILYTKIFTMFIYNIFGNNEIYTIAKYY*IQYL 204
           I+Y K    +IY+I+    IYTI + Y I Y+
Sbjct: 15  IIYIKSTIYYIYHIYIPYTIYTIHQIYHIYYI 46


>Z74030-13|CAA98445.2|  336|Caenorhabditis elegans Hypothetical
           protein D1054.12 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 103 CIIFLGK*IYIVAVLQXLKIIIYLYHRLTKEQ 8
           C+IF+   I   A+   L I  YLYH ++K Q
Sbjct: 199 CLIFMFSLIIPQALYFVLSIFWYLYHTVSKSQ 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,716,885
Number of Sequences: 27780
Number of extensions: 184911
Number of successful extensions: 402
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)