Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_N01
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   1.7  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   1.7  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   1.7  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   1.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.0  

>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 287 KIFTMFIYNIFGNNEIYTIAKYY*IQYL 204
           KI +  + N   NN  Y   +YY I Y+
Sbjct: 302 KIISSLLNNTIHNNNNYKKLQYYNINYI 329


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 287 KIFTMFIYNIFGNNEIYTIAKYY*IQYL 204
           KI +  + N   NN  Y   +YY I Y+
Sbjct: 313 KIISSLLNNTIHNNNNYKKLQYYNINYI 340


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 287 KIFTMFIYNIFGNNEIYTIAKYY*IQYL 204
           KI +  + N   NN  Y   +YY I Y+
Sbjct: 313 KIISSLLNNTIHNNNNYKKLQYYNINYI 340


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 287 KIFTMFIYNIFGNNEIYTIAKYY*IQYL 204
           KI +  + N   NN  Y   +YY I Y+
Sbjct: 302 KIISSLLNNTIHNNNNYKKLQYYNINYI 329


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 95  YNALYTKHCYTSKQL 139
           YN  YTK C T K+L
Sbjct: 446 YNKNYTKFCSTEKRL 460


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 367 TYIVCGVLNYKLPTFQFLAND 305
           T++VCG+L   L  F ++  D
Sbjct: 367 THLVCGILGSILVPFFYVQED 387


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 37  YLYHRLTKEQSH 2
           Y+YH L  EQS+
Sbjct: 176 YIYHTLVAEQSY 187


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 37  YLYHRLTKEQSH 2
           Y+YH L  EQS+
Sbjct: 191 YIYHTLVAEQSY 202


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 37  YLYHRLTKEQSH 2
           Y+YH L  EQS+
Sbjct: 79  YIYHTLVAEQSY 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,753
Number of Sequences: 438
Number of extensions: 2418
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)