Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_M23
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 129 2e-30
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 125 4e-29
09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644... 40 0.001
06_01_0414 + 2948868-2948998,2949136-2949202,2949442-2949531,295... 36 0.040
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 35 0.053
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 33 0.22
05_01_0243 - 1806770-1806832,1806942-1807061,1807275-1807457,180... 33 0.22
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 30 1.5
01_06_0120 + 26622285-26622433,26623156-26623219,26623310-266233... 30 2.0
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 29 2.6
05_07_0175 - 28164252-28164529,28165381-28166560 29 3.5
06_03_1475 - 30391555-30391890,30391982-30392233,30392358-303926... 28 6.1
03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380 28 6.1
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 129 bits (311), Expect = 2e-30
Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Frame = +2
Query: 251 EYEKAQQRSLNDPEGFWGEVGSELEWTKPWD------RVLDDSNAPFT-KWWVGGEMSVC 409
+Y+K +RS+NDP GFW E+ W + W+ LD + P W+ GG+ ++C
Sbjct: 70 KYQKMYERSINDPAGFWSEIADAFYWKEKWNPSEVCSENLDVTKGPVQISWFKGGKTNIC 129
Query: 410 YNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLI 589
YNAVDR+V G G++ A+ + K++Y+EL D+V +LA L ++GV KG V+I
Sbjct: 130 YNAVDRNVEAGNGDKIAMYWEGNEPGQDGKLTYSELLDRVCQLANYLKSVGVGKGDAVII 189
Query: 590 YMPLVPXAIIXMLATNRIGAIHSVVFGGFAAREL 691
Y+P++ I MLA RIGA+HSVVF GF+A L
Sbjct: 190 YLPMLLELPIAMLACARIGAVHSVVFAGFSADSL 223
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 125 bits (301), Expect = 4e-29
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Frame = +2
Query: 251 EYEKAQQRSLNDPEGFWGEVGSELEWTKPW--DRV----LDDSNAPFT-KWWVGGEMSVC 409
+Y++ +RS++DP GFW E+ W W D V LD + P +W+ GG+ ++C
Sbjct: 220 QYQEMYRRSIDDPAGFWSEIAETFYWKHKWNPDEVCTENLDVTKGPIKIEWFKGGKTNIC 279
Query: 410 YNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLI 589
YNAVDR+V G GE+ A+ + K++Y+EL ++V +LA L ++GV KG V+I
Sbjct: 280 YNAVDRNVEAGDGEKIAMYWEGNEPGQDAKLTYSELLNKVCQLANYLKSVGVGKGDAVVI 339
Query: 590 YMPLVPXAIIXMLATNRIGAIHSVVFGGFAAREL 691
Y+P++ I MLA RIGA+HSVVF GF+A L
Sbjct: 340 YLPMLMELPIAMLACARIGAVHSVVFAGFSADAL 373
>09_03_0147 +
12763526-12763815,12763938-12764067,12764185-12764435,
12764546-12764750,12764878-12764918,12765006-12765131,
12765429-12765502,12765671-12765891,12766251-12766345,
12766463-12766679,12766781-12766906,12766988-12767086,
12767171-12767380,12767496-12767606
Length = 731
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Frame = +2
Query: 275 SLNDPEGFWGEVGSELEWTKPWDR--VLDDSNA-PFTKWWVGGEMSVCYNAVDRHVVNGR 445
S+ +PE +W V E+ T + +L +++A P +W G ++ N +
Sbjct: 135 SIENPEAYWKMVFEEMGITFSVEPSCILRENDAYPGGEWLPGAVLNAAANCLTAKPGRSS 194
Query: 446 GEQFALVHDSPL-TDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIX 622
+ + D ++ + ++ EL+ +V +A L L ++KG+ + I MP+ A++
Sbjct: 195 DDVAIVWRDEGKDSEPLNFVTLEELRKKVCLVANALDALNLAKGSAIAIDMPMNVNAVVI 254
Query: 623 MLATNRIGAIHSVVFGGFAA 682
LA G + + FAA
Sbjct: 255 YLAIVLAGYVVVSIADSFAA 274
>06_01_0414 +
2948868-2948998,2949136-2949202,2949442-2949531,
2950509-2950565,2950684-2950732,2950934-2951010,
2952776-2952815,2952909-2953003,2953174-2953341,
2953634-2953721,2954275-2954341,2954571-2954646,
2954759-2954876,2954988-2955233,2955296-2955471,
2956056-2956238,2956331-2956450,2956586-2956621
Length = 627
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 500 ISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIG 646
++Y E+ D V +LA ++ G+SKG IY P II M A N +G
Sbjct: 73 MTYKEVYDVVMKLAASISKSGISKGESCGIYGANCPEWIISMEACNALG 121
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 500 ISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIG 646
I+Y E D V ++ + +LGV KG R IY P +I M A N G
Sbjct: 85 ITYKEAYDTVIKVGASIRSLGVGKGGRCGIYGANCPEWVISMQACNAHG 133
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +2
Query: 488 TVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIGAI 652
T +S+ ++ R+A L+++GV G+ V++ +P + LA++R+GA+
Sbjct: 47 TGETLSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAV 101
>05_01_0243 -
1806770-1806832,1806942-1807061,1807275-1807457,
1807554-1807693,1807768-1808010,1808664-1808781,
1808902-1808977,1809054-1809120,1809201-1809288,
1809381-1809491,1809632-1809799,1809946-1810040,
1810123-1810162,1810242-1810318,1810607-1810655,
1810756-1810812,1810959-1811048,1811160-1811223,
1812085-1812245
Length = 669
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 503 SYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATN 637
SY E+ ++V ++ L LGV G+R+ IY P I+ M A N
Sbjct: 83 SYREVYEEVLQVGSALQQLGVKPGSRIGIYGSNCPQWIVAMQACN 127
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 575 PPYSLPTLSAFQPDARPDLLAHCKRF 498
P ++ L+A PDA PDLLA C+ F
Sbjct: 124 PTFASLLLAALLPDATPDLLAFCEGF 149
>01_06_0120 +
26622285-26622433,26623156-26623219,26623310-26623399,
26623588-26623644,26623832-26623880,26624320-26624396,
26624918-26624957,26625037-26625131,26625525-26625689,
26625777-26625887,26625971-26626058,26626715-26626781,
26626955-26627063,26627155-26627272,26628345-26628590,
26628956-26629095,26629262-26629444,26629560-26629679,
26629932-26629967
Length = 667
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 503 SYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIG 646
+Y E+ D +++ + + G++KG+R IY P II M A N G
Sbjct: 79 TYKEVFDLSTKIGNSIRSRGLAKGSRCGIYGANCPEWIITMEACNAHG 126
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 503 SYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIGA 649
SY E+++ R A L LGV KG V+ + P L R+GA
Sbjct: 58 SYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGA 106
>05_07_0175 - 28164252-28164529,28165381-28166560
Length = 485
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 395 EMSVCYNAVDRHVVNGRGEQFALVHDSPLTDTVRK 499
E+S+C NA R++V RG+ ++ + P + R+
Sbjct: 248 ELSLCRNAAARYLVESRGQLLMVIRERPAYNQSRE 282
>06_03_1475 -
30391555-30391890,30391982-30392233,30392358-30392619,
30393232-30393320,30393408-30393592,30393673-30393781,
30393886-30393942,30394047-30394196
Length = 479
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 296 FWGEVGSELEWTKPWDRVLDDSNAPFTKWWVGGEMSVCYN 415
F+ + EL KP + L + F WW G +++ YN
Sbjct: 219 FYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIALLYN 258
>03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380
Length = 356
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 415 RGGPTRGQWKRR 450
RGGP RG WKRR
Sbjct: 104 RGGPMRGDWKRR 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,135,070
Number of Sequences: 37544
Number of extensions: 452222
Number of successful extensions: 1213
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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