Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_M23
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 99 1e-21
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 38 0.005
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 32 0.45
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 31 1.0
AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine r... 30 1.4
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 30 1.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.2
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 28 5.5
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 5.5
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 99 bits (238), Expect = 1e-21
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Frame = +2
Query: 236 CGTTPEYEKAQQRSLNDPEGFWGEVGSELEWTKPWDRVLD---DSNAP--FTKWWVGGEM 400
C Y + S+ND + FW V SEL + + + L+ DS A F K+ G +
Sbjct: 24 CAGLQSYHDLYRSSINDADEFWRTVSSELHFEQGTSKGLEWNFDSKAGNVFVKFMDGAKT 83
Query: 401 SVCYNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGAR 580
++ YN ++R++ G G + A + + +YNEL QV + + L + GV +G
Sbjct: 84 NISYNCLERNIKRGYGNKIAYIFEGNEPTDTSTWTYNELHAQVVQFSAVLRSHGVKRGDV 143
Query: 581 VLIYMPLVPXAIIXMLATNRIGAIHSVVFGGFAAREL 691
V +Y+P++P + MLA RIGA+HSVVF GF+A L
Sbjct: 144 VALYLPMIPELAVAMLACARIGAMHSVVFAGFSAESL 180
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 99 bits (238), Expect = 1e-21
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Frame = +2
Query: 236 CGTTPEYEKAQQRSLNDPEGFWGEVGSELEWTKPWDRVLD---DSNAP--FTKWWVGGEM 400
C Y + S+ND + FW V SEL + + + L+ DS A F K+ G +
Sbjct: 34 CAGLQSYHDLYRSSINDADEFWRTVSSELHFEQGTSKGLEWNFDSKAGNVFVKFMDGAKT 93
Query: 401 SVCYNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGAR 580
++ YN ++R++ G G + A + + +YNEL QV + + L + GV +G
Sbjct: 94 NISYNCLERNIKRGYGNKIAYIFEGNEPTDTSTWTYNELHAQVVQFSAVLRSHGVKRGDV 153
Query: 581 VLIYMPLVPXAIIXMLATNRIGAIHSVVFGGFAAREL 691
V +Y+P++P + MLA RIGA+HSVVF GF+A L
Sbjct: 154 VALYLPMIPELAVAMLACARIGAMHSVVFAGFSAESL 190
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +2
Query: 446 GEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXM 625
G + ALVHD+ + I++ E+ VS+L KL LG+S+G +L+ +P +
Sbjct: 22 GIRQALVHDNQV------ITFEEIPQLVSKLVYKLLELGISQGDTILVCLPNSIWYPLLF 75
Query: 626 LATNRIGAIHSVVFGGFAAREL 691
L+ +IGA+ S + A E+
Sbjct: 76 LSCAKIGAVLSGISHESTAGEI 97
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 491 VRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIGAIHSVVFG 670
VR ++Y EL D R A ++ GV G R+L+ M ++ L +GAI ++
Sbjct: 112 VRCVTYEELVDGSKRTANYMSHHGVKNGDRILMCMENTVEYVLYQLGGFLLGAIPVLINP 171
Query: 671 GFAARE 688
A E
Sbjct: 172 SHIASE 177
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +2
Query: 434 VNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXA 613
++ G A+V D+ ++ Y+E+++ A +L L V+ G+RV + A
Sbjct: 27 ISAHGSNLAIVD----VDSGKQWRYSEIRNWCEMCATRLKELQVTSGSRVAVITGTTGQA 82
Query: 614 IIXMLATNRIGAIHSVVFGGFAAREL 691
I LA + IG V G A E+
Sbjct: 83 IFVHLACSIIGCSAVAVNGWNAVDEI 108
>AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 24 protein.
Length = 315
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -3
Query: 261 FSYSGVVPHTL*HSMSAAETKVFFLSSLIDDSNLLFSILLPTSFCWCILKPKNEPKAETK 82
FSYS +P T A + + +L + S L+ L I K KN+ K +
Sbjct: 9 FSYSDPLPFTCNEDPDVALSILIYL---VQASYLVLGATLNILIICAIFKSKNKEKYRSN 65
Query: 81 KIKYIFFSNFNCRV---SVVSFFLELIGR 4
Y++ S + V +FF LIGR
Sbjct: 66 SFYYLYTSEAIISIYDTLVAAFFSRLIGR 94
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 491 VRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPXAIIXMLATNRIGAIHSVVFG 670
+RK +Y E V ++A L TLG+ KG RV ++ P ++ A G I V
Sbjct: 85 IRK-TYEEFYHDVRQMAASLYTLGLEKGDRVGVWGPNYYEWVVLQYACAFAGVIQVNVNP 143
Query: 671 GFAAREL 691
+ EL
Sbjct: 144 HYLHEEL 150
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 368 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 514
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 368 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 514
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 1952 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2000
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 368 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 514
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 368 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 514
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 368 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 514
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 1952 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2000
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 368 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 514
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 198 VFFLSSLIDDSNLLFSILLPTSFCWCILKPKNEPKAETKKIK 73
VFF+ L S+++ + L C CIL P +P + K +K
Sbjct: 40 VFFVDILAKSSHIVNLLWLCKIICTCILFPLQKPLSAGKSLK 81
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 287 PEGFW-GEVGSELEWTKPWDRVLDDSNAPFT 376
PE F+ E+ S+LE+ K W R+++ S PFT
Sbjct: 3109 PEQFFEDELDSKLEYEK-WRRIIEASECPFT 3138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,818,696
Number of Sequences: 27780
Number of extensions: 368314
Number of successful extensions: 1082
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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