Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_M13
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.1  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 678 HKPWQSKYLARLWI 719
           H+P+ ++Y AR WI
Sbjct: 385 HRPYVAQYNARRWI 398


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -1

Query: 751 HFDFFWSQFSHIQSLAKYFDC-QGLCFCQSCL 659
           H D+ +  F H  S  +Y+ C  G    Q C+
Sbjct: 98  HCDWLYGIFGHETSCTRYWTCWNGTATEQLCI 129


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +3

Query: 138 QPYSRRKVVCIKSNMLWKL*VMREHRWV------F*QRMVFFWLQN 257
           +PYS+ + + ++   L+   V ++ RW         +R V  W QN
Sbjct: 248 KPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQN 293


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 71  FGHINHK*YIFVEKMARRYDTRTTI 145
           FG++    Y+F+   +R+ DT T +
Sbjct: 290 FGYVIDTMYLFIHIRSRQEDTDTLV 314


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 71  FGHINHK*YIFVEKMARRYDTRTTI 145
           FG++    Y+F+   +R+ DT T +
Sbjct: 246 FGYVIDTMYLFIHIRSRQEDTDTLV 270


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 581 HSFHWDQTGRADNHSAYPSP 522
           HS  W Q G A + S  P P
Sbjct: 198 HSGFWGQLGAAVDESRTPRP 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,193
Number of Sequences: 336
Number of extensions: 4834
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)