Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_M13
(832 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 295 7e-81
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 148 8e-37
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 141 1e-34
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 136 5e-33
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 114 2e-26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 109 5e-25
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 93 4e-20
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 46 5e-06
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 30 0.46
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 27 3.3
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 27 4.3
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 7.5
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 25 10.0
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 10.0
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 10.0
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 295 bits (723), Expect = 7e-81
Identities = 136/242 (56%), Positives = 185/242 (76%), Gaps = 2/242 (0%)
Frame = +2
Query: 113 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 292
M+R YD+RTTIFSPEGRLYQVEYA+EAI+HAG +LGI+A DGI+LAAE++ T+KLL++
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 293 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 472
+EK+Y + D+M+C+VAG+T+DAN+L N R + Q+YL + E +PCEQLV +CD+KQ
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG 120
Query: 473 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 652
YTQYGG RPFGVS LY GWD GYQL+QS+PSGNYG W+A IG NS + S ++QEYK
Sbjct: 121 YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK 180
Query: 653 ENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTR--KDNKTIIRILTNTEVEKLIA 826
+ + L EA A+A+K LSKTLD LT EK+E AT+T+ NK + +I + E+ +++
Sbjct: 181 D-DINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLN 239
Query: 827 EF 832
++
Sbjct: 240 KY 241
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 148 bits (359), Expect = 8e-37
Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 1/220 (0%)
Frame = +2
Query: 113 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 292
M +Y T FSP G+L Q+EYA+ A++ TS+GI ATDG++LA E++ T++L
Sbjct: 1 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGAS 60
Query: 293 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQ-RYLLQYGESIPCEQLVSWLCDVKQ 469
EK+ + D+ +G+ D VL ++ R +AQ Y Y E P + LV + V Q
Sbjct: 61 L-EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQ 119
Query: 470 AYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 649
TQ GG RPFGVS+L G D+ G LYQ DPSG Y WKAT IG +S AA + L++ Y
Sbjct: 120 ESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRY 178
Query: 650 KENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTRK 769
+ E L +A AI L +T + +LT + +E+A ++ K
Sbjct: 179 ND-ELELDDAVHTAILALKETFE-GELTEDNIEIAVVSTK 216
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 141 bits (341), Expect = 1e-34
Identities = 80/219 (36%), Positives = 128/219 (58%), Gaps = 6/219 (2%)
Frame = +2
Query: 125 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 304
YD FSPEGRL+QVEYA+EAI T++G+ D ++L E+R T+ L+ E EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLM-ESHSVEK 66
Query: 305 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ- 481
+++++ + C+++G+T+DA + R+ Q + Y E E +CD+ + +
Sbjct: 67 LFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEG 126
Query: 482 YGGK-----RPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQE 646
G+ RPFGV++L G D+H G QLY S+PSG Y ++A IG+ S A S L +E
Sbjct: 127 EDGEERIMSRPFGVALLIAGIDEH-GPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKE 185
Query: 647 YKENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLT 763
+ + TL EA+ L +KVL + ++ KL + V++A +T
Sbjct: 186 F-HKDMTLEEAEVLILKVLRQVME-EKLDSKNVQLAKVT 222
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 136 bits (328), Expect = 5e-33
Identities = 77/236 (32%), Positives = 133/236 (56%), Gaps = 1/236 (0%)
Frame = +2
Query: 125 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 304
YD ++FSP+GRL QVEY EA+ T++ + + I++ ER+N KL + F +K
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNF-QK 62
Query: 305 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQY 484
I +++ + + AG+ +DA +L ++ R+ AQ + L + + E L ++ V+Q YTQ
Sbjct: 63 IAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQS 122
Query: 485 GGKRPFGVSILYMGWDKHYGY-QLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENE 661
GG RPFGVS L G+D ++YQ++P+G Y WKAT IG S AA L++ +KE
Sbjct: 123 GGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEG- 181
Query: 662 TTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVEKLIAE 829
L+ + + + V S L++ + +E+A + D + L + +++ ++ E
Sbjct: 182 --LSRDETIHLAV-SSLLEVVQTASGNIELAIM---DPGKDVEFLHSDKIDTIVKE 231
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 114 bits (274), Expect = 2e-26
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Frame = +2
Query: 116 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVF 292
AR +D T+FSPEGRLYQVEYA +A ++AG TS+G+ + + ++++ +KL+D
Sbjct: 4 ARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDAST 63
Query: 293 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 472
++ + + C + G +DA + R A + + G +PC+ L + ++ Q
Sbjct: 64 VKH-VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQV 122
Query: 473 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 652
TQ RP GV++ + D G L++ DP+G Y G+KAT G ++ L++ +K
Sbjct: 123 STQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFK 182
Query: 653 EN--ETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVE 814
++ + L + I+ L +L T ++++ + +D+K R+L+ E+E
Sbjct: 183 KDGIPSNLTDTVETGIQALMSSLS-TDFKSTELQIGVV--EDDKP-FRVLSVEEIE 234
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 109 bits (262), Expect = 5e-25
Identities = 67/223 (30%), Positives = 122/223 (54%), Gaps = 2/223 (0%)
Frame = +2
Query: 122 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 301
+YD T +SP+GRL+QVEYA+EAI ++G+++ +L A +RN +L + +
Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSS---YQK 61
Query: 302 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 481
K+ +++D + ++AG+ DA VL+N ++ A + IP +L+S + + Q TQ
Sbjct: 62 KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQ 121
Query: 482 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENE 661
G+RP+GV L +G+D+ G L + PSG + T +G+ S +A + +++
Sbjct: 122 EYGRRPYGVGFLVIGYDES-GPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFP 180
Query: 662 TTLAEAQAL-AIKVLSKTLDM-TKLTPEKVEMATLTRKDNKTI 784
+ E L A++ L TL +LT E V ++ + + + T+
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTL 223
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 93.1 bits (221), Expect = 4e-20
Identities = 60/202 (29%), Positives = 96/202 (47%)
Frame = +2
Query: 146 FSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDD 325
FSP+GRL+Q EYA +A+ +A T +GI DG++LA E+ T+KLL + + +I ++
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLL-KPRVNNRIGSVDRH 72
Query: 326 MVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFG 505
+ + G D + R A + YG IP + L + Q +T Y RPFG
Sbjct: 73 IGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFG 132
Query: 506 VSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQA 685
V +D G LY +P+G Y G+ G A + L ++ + + +A
Sbjct: 133 VMSFVATYDSE-GPHLYMVEPNGVYWGYNGAAAGKGRQVARNEL-EKLNFSSLKMKDAVK 190
Query: 686 LAIKVLSKTLDMTKLTPEKVEM 751
A ++L T D ++EM
Sbjct: 191 EAARILYATHDEENNKEHEIEM 212
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 46.4 bits (105), Expect = 5e-06
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Frame = +2
Query: 194 ISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSDANVLT 373
+ + GT++ I +LA + R+ N F +++++ DD+V +G +DA L
Sbjct: 10 VQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALAL- 68
Query: 374 NELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKR--PFGVSILYMGWDKHYGY 547
++ I QR L + S C V+ T GKR P+ V G DK
Sbjct: 69 --VKRIQQRIDLYHDNHERKMSAQSCACMVR---TLLYGKRFFPYYVYTTVAGIDKEGKG 123
Query: 548 QLYQSDPSGNYGGWKATCIGNNSAA 622
++Y DP G+Y + C SAA
Sbjct: 124 EIYSFDPVGSYE--REWCRAGGSAA 146
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.46
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 617 HYCYRCMLLSTPHSFHWDQTGRADNHSAYPSPYT 516
HYC +C + P S+H R N + P+T
Sbjct: 400 HYCLKCFQVKPPRSYHCGACKRCINRYDHHCPWT 433
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 27.1 bits (57), Expect = 3.3
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 527 WDKHYGYQLYQSDPSG--NYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKV 700
+DK YG Q D N G K +N+ + L +E K E EA+ +A KV
Sbjct: 46 YDKLYGEQDLSKDLENTLNVSGTK----DSNAEEQPAKLTKEEKRVERE--EAKRMASKV 99
Query: 701 LSKTLDMTK 727
L KT++ TK
Sbjct: 100 LIKTIERTK 108
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 224 LATDGILLAAERRNTNKLLDEVFFSE 301
L + GIL +R+NT L+ V++SE
Sbjct: 6 LLSKGILSIIKRKNTGNLIPHVYYSE 31
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.8 bits (54), Expect = 7.5
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 381 NSFVKTLASDVIPATEQTMSSLSL*IFSEKNTSSRSLLVFLRSA-AKRIPSVAKIPSDVP 205
NSF TL +D +P SL +F + T SR L F+R + PS + +P
Sbjct: 382 NSFDFTLENDQVPPRLIASECTSLEVFIQHITLSRILSHFVRKVYPVKSPSDSHCKVSLP 441
Query: 204 A 202
A
Sbjct: 442 A 442
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 10.0
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +2
Query: 107 EKMARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDE 286
+ R +D R+ FSP L + ++ +I A + +TDG L + R L
Sbjct: 119 DSKVRLWDCRSNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGT--LSS 176
Query: 287 VFFSEKIYKLNDDMVCS---VAGITSDANVLTNELRLIAQRYL 406
+FS I + S ++ + S ++L E I + Y+
Sbjct: 177 DYFSHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILKSYI 219
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 377 ELRLIAQRYLLQYGESIPCEQLVS---WLCDVKQAYTQY 484
EL + RYLLQ+G S EQ + WL + + T Y
Sbjct: 728 ELLKKSTRYLLQFGLSTSLEQQIPTPYWLAPLNLSCTDY 766
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.4 bits (53), Expect = 10.0
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -2
Query: 459 SQSQETNCSQGIDSPYCSRYL*AISLNSFVKTLASDVIPATEQTMSSLSL*IFSEKNTSS 280
+QSQ+ N +G S S + SL S + +S P+T + SS S S + SS
Sbjct: 103 AQSQQFNIVEGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSS 162
Query: 279 RS 274
S
Sbjct: 163 SS 164
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,578,466
Number of Sequences: 5004
Number of extensions: 78332
Number of successful extensions: 231
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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