Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_M08
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127038-1|BAC86798.1|  232|Homo sapiens protein ( Homo sapiens ...    30   5.9  
AJ406951-1|CAC27590.1|  154|Homo sapiens keratin associated prot...    30   5.9  
BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated prot...    30   7.8  
AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated prot...    30   7.8  

>AK127038-1|BAC86798.1|  232|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45094 fis, clone BRAWH3030810. ).
          Length = 232

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 142 SFRTHCCCYCWNPCAKPACCG 204
           S   +C C  W PC +PAC G
Sbjct: 88  SISLNCGCPAWVPCERPACVG 108


>AJ406951-1|CAC27590.1|  154|Homo sapiens keratin associated protein
           9.9 protein.
          Length = 154

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 157 CCCYCWNPCAKPACCGNEYWCYTRHRPT 240
           C   C  PC +PACC N     T  +PT
Sbjct: 43  CVSSCCQPCCRPACCQNTCCRTTCCQPT 70


>BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 151 THCCCYCWNPCAKPACCGNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 315
           THCC    +PC +P CC       T  +PT  +T   T+  +   C+    + C  P
Sbjct: 2   THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54


>AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated protein
           9.2 protein.
          Length = 174

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 151 THCCCYCWNPCAKPACCGNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 315
           THCC    +PC +P CC       T  +PT  +T   T+  +   C+    + C  P
Sbjct: 2   THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,556,554
Number of Sequences: 237096
Number of extensions: 998721
Number of successful extensions: 1954
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)