Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L18
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    33   0.17 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    33   0.23 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    31   0.69 
Z81115-2|CAB03292.1|  314|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z47356-8|CAD27185.1|  477|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z47075-8|CAA87381.2|  477|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    29   3.7  
Z81134-5|CAB54316.1|  101|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical p...    28   6.4  
AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death ab...    28   8.5  

>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +3

Query: 588 RSKHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDVANIX--WL--CGGVLIXERFVLTA 755
           R + C  +    I  G  A ++E P  V +    +V NI   W   C G L   R +LTA
Sbjct: 29  RLEDCGKNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTA 88

Query: 756 GHC 764
            HC
Sbjct: 89  THC 91


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 615 DELIIGGTDAGVNEYPHMVLLGYGDDVANIXW-LCGGVLIXERFVLTAGHCLS 770
           D  +IGG+++  + +P  V L     ++ +    CGG LI   FVLTA HC +
Sbjct: 55  DHRLIGGSESSPHSWPWTVQL-----LSRLGHHRCGGSLIDPNFVLTAAHCFA 102


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 624 IIGGT--DAGVNEYPHMVLLGYGDDVANIXWLCGGVLIXERFVLTAGHC 764
           IIGG   D G N    +V   YGD+   I  LCG  +I + +++TA HC
Sbjct: 38  IIGGNSIDDGANWMAKLV--SYGDNGQGI--LCGATVIDDFWLVTAAHC 82


>Z81115-2|CAB03292.1|  314|Caenorhabditis elegans Hypothetical
           protein T05D4.2 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 408 EYVPPSYDYQSNNGDKKCEDVPADLTS-PKTGQKAWDKCIEYQEQ 539
           E++  ++ Y  NN   +C ++  D+ S P+   K  D+C EYQ Q
Sbjct: 43  EHLTSAHSYTKNN-HCQCYEIAVDICSEPRVRVKGLDRCWEYQIQ 86


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 669 VLLGYGDDVANIXWLCGGVLIXERFVLTAGHCL 767
           V+  + D   N+   CGGVLI    V+T+ HC+
Sbjct: 34  VITRFPDGTTNV---CGGVLIAPSIVITSAHCV 63


>Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical
           protein T04A8.3 protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +3

Query: 426 YDYQSNNGD--KKCEDVPADLTSPKTGQKAWDKCIEYQEQLVYPCEKGVALTGEISRSKH 599
           +D   NN D  KKC D+ A L+S  T ++   K ++     VYP +  +A+     R + 
Sbjct: 295 HDMSMNNDDAEKKCNDMGAHLSSFTTYEEL--KLLDEMILEVYPNDNNIAVWLGAKRREE 352

Query: 600 CHHDADELIIGGTDAGVNE 656
           C  D  +   GG    +++
Sbjct: 353 C-GDLSKNFTGGYSKDIHD 370


>Z47356-8|CAD27185.1|  477|Caenorhabditis elegans Hypothetical
           protein E02H1.7 protein.
          Length = 477

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
 Frame = +3

Query: 36  LASDRRWRQTRHVPYERNK*CANNKLT--LNSLKMD-QSIYLLLMSVLFVCVHCEFEGEE 206
           +++DRRWRQ +   Y++   C  +++   L +LK+  Q I ++ + VLF C  C  +  E
Sbjct: 342 VSADRRWRQEK--LYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNC-GCSSDYSE 398

Query: 207 CKKGNLLGVCTNIRKCQSAL 266
             + +   V T   K  SAL
Sbjct: 399 ITEASRRIVLTFRNKVVSAL 418


>Z47075-8|CAA87381.2|  477|Caenorhabditis elegans Hypothetical
           protein E02H1.7 protein.
          Length = 477

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
 Frame = +3

Query: 36  LASDRRWRQTRHVPYERNK*CANNKLT--LNSLKMD-QSIYLLLMSVLFVCVHCEFEGEE 206
           +++DRRWRQ +   Y++   C  +++   L +LK+  Q I ++ + VLF C  C  +  E
Sbjct: 342 VSADRRWRQEK--LYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNC-GCSSDYSE 398

Query: 207 CKKGNLLGVCTNIRKCQSAL 266
             + +   V T   K  SAL
Sbjct: 399 ITEASRRIVLTFRNKVVSAL 418


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 711 LCGGVLIXERFVLTAGHC 764
           +CGG LI  + VLTA HC
Sbjct: 61  ICGGTLITLKHVLTAAHC 78


>Z81134-5|CAB54316.1|  101|Caenorhabditis elegans Hypothetical
           protein T28D6.9 protein.
          Length = 101

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/27 (37%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -2

Query: 488 RRQIRRYILAFLV-AIVGLVIIGGWHV 411
           RRQIR+Y++A +V +I  ++++  W +
Sbjct: 50  RRQIRKYVIASIVGSIFWIIVLSAWEI 76


>U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical
           protein F42A10.7 protein.
          Length = 187

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -3

Query: 607 WWQCLLRLISPVSATPFSHGYTSCS*YSIHLSHAFCPVLGDVRSAGTSSHFLSPLL 440
           WWQC    +  ++ATP+         Y IHLS    P++   +    +S ++SP L
Sbjct: 41  WWQCSSGPVQFLNATPYDSTGKQYE-YPIHLSQ---PIVVKTQINNPTSTYVSPNL 92


>AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death
           abnormality protein 8 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -2

Query: 554 TRIHELLLIFNTFVPCLLP-GLGRRQIR-RYILAFLVAIVGLVII 426
           T I +LLL+ NTF+   +P  +     R RY+ A+ V  + ++++
Sbjct: 316 THIEKLLLLINTFIHIFIPFNMVEGNTRWRYLTAYSVEFIEMMLV 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,188,318
Number of Sequences: 27780
Number of extensions: 353112
Number of successful extensions: 893
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)