Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L17
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071266-1|AAL48888.1|  160|Drosophila melanogaster RE30049p pro...    32   0.47 
AE014298-2727|AAF48849.2|  160|Drosophila melanogaster CG15044-P...    32   0.47 
BT023852-1|AAZ86773.1|  146|Drosophila melanogaster IP13646p pro...    29   4.4  
AE013599-1757|AAF58345.1|  607|Drosophila melanogaster CG6209-PA...    29   4.4  

>AY071266-1|AAL48888.1|  160|Drosophila melanogaster RE30049p
           protein.
          Length = 160

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 214 STIGKSIQGILAY-DKTHTTASANITQGGIGFTFVNLRMKSERGNKLNYDVYIY 372
           ++ G ++  I  Y D T   A   +T+GGIG T V + + S +     Y+ +IY
Sbjct: 105 ASTGVTLTSIEVYVDMTADDAGGYLTKGGIGQTNVEILLTSNQTRSFVYETFIY 158


>AE014298-2727|AAF48849.2|  160|Drosophila melanogaster CG15044-PA
           protein.
          Length = 160

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 214 STIGKSIQGILAY-DKTHTTASANITQGGIGFTFVNLRMKSERGNKLNYDVYIY 372
           ++ G ++  I  Y D T   A   +T+GGIG T V + + S +     Y+ +IY
Sbjct: 105 ASTGVTLTSIEVYVDMTADDAGGYLTKGGIGQTNVEILLTSNQTRSFVYETFIY 158


>BT023852-1|AAZ86773.1|  146|Drosophila melanogaster IP13646p
           protein.
          Length = 146

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 97  LFVGTNINRPMVYHHNAKYDSKLFRKRVENLHYV 198
           +F+G +++R + YH      ++LF K   NLH+V
Sbjct: 2   VFLGRHLSRSLAYHLKQPSWNRLFLKPRTNLHHV 35


>AE013599-1757|AAF58345.1|  607|Drosophila melanogaster CG6209-PA
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 97  LFVGTNINRPMVYHHNAKYDSKLFRKRVENLHYV 198
           +F+G +++R + YH      ++LF K   NLH+V
Sbjct: 2   VFLGRHLSRSLAYHLKQPSWNRLFLKPRTNLHHV 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,969,922
Number of Sequences: 53049
Number of extensions: 330504
Number of successful extensions: 683
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)