Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L17
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.98 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   2.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   2.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +1

Query: 169 RKRVENLHYVLPQVPSTIGKSIQGILAYDKTHTTASANITQGGIGFTFVNLRMKSERG 342
           RK++  L   +   P+ +  + +  +    T T     ITQ G G  F+ ++   ERG
Sbjct: 463 RKQISELESNMQISPNELKPNDKSQVIKQNTWTVFRDAITQTGTGPAFLTIKEWIERG 520


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 414 CLLNIY*LLKQYLNVDVDIVIKLV 343
           CLL  + L+    NVD DI++ L+
Sbjct: 76  CLLEAFSLVDDEANVDEDIMLGLL 99


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 414 CLLNIY*LLKQYLNVDVDIVIKLV 343
           CLL  + L+    NVD DI++ L+
Sbjct: 76  CLLEAFSLVDDEANVDEDIMLGLL 99


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 236 RAFWPMIRLTPPLPLTSLKVESD 304
           R     +R+ PP+PL + ++++D
Sbjct: 402 RCLLETLRMYPPVPLIAREIKTD 424


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
 Frame = +1

Query: 130 VYHHNAKYDSKLFRKRVENLHYVLPQVPSTIG-------KSIQGILAYDKTHTTASANIT 288
           VY   A +D  + R +   L  +L  VP+          KS+Q I  YD+ +    A I 
Sbjct: 95  VYGTLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIV 154

Query: 289 QG 294
            G
Sbjct: 155 NG 156


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 54  YISPRRCGDRRMRSP 98
           YI+   CGD R+ SP
Sbjct: 366 YINTAPCGDARIFSP 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,079
Number of Sequences: 438
Number of extensions: 2073
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)