Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L12
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.7  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 334 IAPISTVAVAHSPLITPAAHIAYSAP 411
           +  +   A + SPL+TP  + AYS P
Sbjct: 5   VRQVKQEADSTSPLLTPPHNPAYSPP 30


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 533 ICRLFCFGYLHFVDLVTIRLIYQ 465
           IC+ FCFG++    +  I + YQ
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQ 547


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 417 SEGSAVGDVSG 385
           S+G+AVGDV G
Sbjct: 60  SDGTAVGDVPG 70


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 187 ALCSCRKAQSTVRCMQAVRCR*WAPR 110
           ALC   + Q++  C    RC  W+ +
Sbjct: 34  ALCQSFRKQNSSSCGNGNRCDLWSEK 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,174
Number of Sequences: 336
Number of extensions: 2109
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)