Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L12
         (587 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ...    30   5.3  
AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens ...    30   5.3  
AB033040-1|BAA86528.1|  462|Homo sapiens KIAA1214 protein protein.     30   5.3  
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.             30   5.3  
AK126559-1|BAC86594.1|  308|Homo sapiens protein ( Homo sapiens ...    30   7.0  
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat...    29   9.2  

>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46149 fis, clone TESTI4000621, moderately  similar to
            Homo sapiens Snf2-related CBP activator protein (SRCAP).
            ).
          Length = 2427

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
 Frame = +1

Query: 115  APITY--TAPLAYTAPLIAPFGNYRGPLS----LAPGQPANVLGADGRPLDTLDVNLDRA 276
            AP+T   +APL  +A   A   +   PL+     APG P+            L + L  A
Sbjct: 1453 APLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATA 1512

Query: 277  AHYTSKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 417
               +S     H  LL   S+ +  + STVA A SP++ PA+ +A   P A
Sbjct: 1513 PSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 1562


>AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44499 fis, clone UTERU3000665, highly  similar
           to Homo sapiens Snf2-related CBP activator protein
           (SRCAP). ).
          Length = 559

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
 Frame = +1

Query: 115 APITY--TAPLAYTAPLIAPFGNYRGPLS----LAPGQPANVLGADGRPLDTLDVNLDRA 276
           AP+T   +APL  +A   A   +   PL+     APG P+            L + L  A
Sbjct: 102 APLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATA 161

Query: 277 AHYTSKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 417
              +S     H  LL   S+ +  + STVA A SP++ PA+ +A   P A
Sbjct: 162 PSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 211


>AB033040-1|BAA86528.1|  462|Homo sapiens KIAA1214 protein protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = -3

Query: 246 EGPAVGAEDVGGLAGGKGQRP------SVVAERRNQRCGVCKRCGVGDGRHESAIYGR 91
           +GPA  A    G  GG   RP      S   +   QR GV +  G G GR E A  GR
Sbjct: 3   KGPAPSARPESGPRGGCASRPRPLRPGSEQQQEERQRPGVGRGWGGGTGRREGAGAGR 60


>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
          Length = 3053

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
 Frame = +1

Query: 115  APITY--TAPLAYTAPLIAPFGNYRGPLS----LAPGQPANVLGADGRPLDTLDVNLDRA 276
            AP+T   +APL  +A   A   +   PL+     APG P+            L + L  A
Sbjct: 1276 APLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATA 1335

Query: 277  AHYTSKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 417
               +S     H  LL   S+ +  + STVA A SP++ PA+ +A   P A
Sbjct: 1336 PSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 1385


>AK126559-1|BAC86594.1|  308|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44595 fis, clone BLADE2004849. ).
          Length = 308

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 281 CAARSKLTSRVSRGLPSAPRTLAGW 207
           C++ S  + R  RGLPSAP    GW
Sbjct: 271 CSSSSAGSRRADRGLPSAPLPTGGW 295


>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
            SRCAP protein.
          Length = 2971

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
 Frame = +1

Query: 115  APITY--TAPLAYTAPLIAPFGNYRGPLS----LAPGQPANVLGADGRPLDTLDVNLDRA 276
            AP+T   +APL  +A   A   +   PL+     APG P+            L + L  A
Sbjct: 1194 APLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLQPSGASPSASALTLGLATA 1253

Query: 277  AHYTSKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 417
               +S     H  LL   S+ +  + STVA A SP++ PA+ +A   P A
Sbjct: 1254 PSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 1303


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,780,131
Number of Sequences: 237096
Number of extensions: 1441852
Number of successful extensions: 4938
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4898
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)