Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L10
         (488 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     85   3e-17
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    78   4e-15
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           73   9e-14
07_01_1001 - 8460467-8460799                                           59   2e-09
07_03_0321 + 16757414-16757743                                         57   9e-09
01_06_0098 - 26416768-26416998                                         30   0.87 
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245...    28   4.6  
12_01_0141 - 1091579-1091983                                           27   6.1  
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877           27   6.1  
07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026     27   6.1  
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349...    27   6.1  
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783...    27   6.1  
05_04_0422 + 21122099-21122194,21122353-21122510,21122651-211228...    27   8.1  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 85.0 bits (201), Expect = 3e-17
 Identities = 38/70 (54%), Positives = 56/70 (80%)
 Frame = +3

Query: 30  MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
           M+ +AA LLAVLGG  +P+A D++  L SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1   MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60

Query: 210 KLSSMPVGGG 239
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 77.8 bits (183), Expect = 4e-15
 Identities = 33/71 (46%), Positives = 52/71 (73%)
 Frame = +3

Query: 27  KMRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 206
           +M++++A LLA L G P P+A D+   L SVG E D  K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252

Query: 207 EKLSSMPVGGG 239
           EK +S+P GGG
Sbjct: 253 EKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 73.3 bits (172), Expect = 9e-14
 Identities = 31/70 (44%), Positives = 50/70 (71%)
 Frame = +3

Query: 30  MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
           M++++A L+A L G  +P A D+   L SVG E D  K++ ++++++GKD+ +LIA GRE
Sbjct: 1   MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60

Query: 210 KLSSMPVGGG 239
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>07_01_1001 - 8460467-8460799
          Length = 110

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = +3

Query: 30  MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
           MR+VAA L+A +GG  +P   DV   L +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60

Query: 210 KLSSMPVG 233
            L+   VG
Sbjct: 61  MLAFGGVG 68


>07_03_0321 + 16757414-16757743
          Length = 109

 Score = 56.8 bits (131), Expect = 9e-09
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = +3

Query: 30  MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
           MR+VAA L+A +GG  +P   DV   L +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60

Query: 210 KLS 218
            L+
Sbjct: 61  MLA 63


>01_06_0098 - 26416768-26416998
          Length = 76

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 69  GKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKD 179
           G P P  A V+  + +V IEAD  + K ++  L GKD
Sbjct: 13  GPPPPPPAVVKI-IETVHIEADSAEFKSIVQRLTGKD 48


>10_08_0104 +
           14824122-14824178,14824274-14824318,14824419-14824536,
           14825522-14825581,14825783-14825891,14825972-14826197,
           14826274-14826390,14826510-14826611
          Length = 277

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 39  VAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLK 149
           V   + A+L GK TP   D+E  L + G    GE++K
Sbjct: 8   VLKEVSALLRGKETPVILDLEESLRAKGDMTQGEEVK 44


>12_01_0141 - 1091579-1091983
          Length = 134

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 126 EADGEKLKKVITELNGKDVEQLIA 197
           E DG+K KKV+  L  ++VE+L++
Sbjct: 30  EEDGKKRKKVVRRLGKEEVERLLS 53


>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
          Length = 258

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +3

Query: 132 DGEKLKKVITELNGKDVEQLIA 197
           DG+K+KKV+  L  ++VE+L++
Sbjct: 36  DGKKMKKVVKRLGKEEVERLLS 57


>07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026
          Length = 453

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 175 LPLSSVITFLSFSPSASIPTELRXXSTSAAAGVGLPPST 59
           L L+    FL  SPSA   + L     SAAA V  P S+
Sbjct: 14  LALALAFLFLLLSPSAPSASHLSSSLASAAAAVSTPASS 52


>07_01_0461 +
           3492302-3492413,3492868-3492964,3493053-3493131,
           3493484-3493794,3494219-3494231
          Length = 203

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -2

Query: 238 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRXXSTSAAAGVGLPPST 59
           PPP         PAA+  S S+P S+V+  ++  PSA +P      S  +       P T
Sbjct: 122 PPPEPTPTPAPAPAAVPPSASVP-STVVPPVAAPPSALLPMSAAGASAMSPMQFAGTPGT 180


>04_04_1197 + 31672019-31672325,31672431-31672740,31673334-31678335,
            31678677-31678715
          Length = 1885

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 193  ISC-STSLPLSSVITFLSFSPSASIPTELRXXSTSAAAGVGLPPSTASKD 47
            +SC  +SLP SS+++ LS    +++PT     S+S    +GL P     D
Sbjct: 1100 LSCVHSSLPPSSIVSKLSIGKVSTLPTV--RGSSSGTLIIGLHPDEVDDD 1147


>05_04_0422 +
           21122099-21122194,21122353-21122510,21122651-21122866,
           21122965-21123379
          Length = 294

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -2

Query: 223 IDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRXXSTSAAAGVGL 71
           +  +  R  A++C+    +++VI F+ F  +  I       S SAAA +G+
Sbjct: 68  VPSATKRTVAVACAAISWIATVIAFVMFLDTGGISVVHGSSSRSAAAELGI 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,842,931
Number of Sequences: 37544
Number of extensions: 147126
Number of successful extensions: 498
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)