BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_L10
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 88 1e-17
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 88 1e-17
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 88 1e-17
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 88 1e-17
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 88 1e-17
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 88 1e-17
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 88 1e-17
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 88 1e-17
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 33 0.70
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 33 0.70
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 33 0.70
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 33 0.70
U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein. 31 2.8
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 29 6.5
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 29 6.5
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 29 6.5
BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 29 8.6
AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 29 8.6
AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 29 8.6
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 29 8.6
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 29 8.6
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 29 8.6
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 29 8.6
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 88.2 bits (209), Expect = 1e-17
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 30 MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
MRYVA+ LLA LGG +P+A D++ L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 210 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
KL+S+P GG MGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 235 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRXXSTSAAAGVGLPPST 59
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 58 ASKDAA 41
+ A+
Sbjct: 723 SHTHAS 728
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 235 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRXXSTSAAAGVGLPPST 59
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 58 ASKDAA 41
+ A+
Sbjct: 723 SHTHAS 728
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 235 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRXXSTSAAAGVGLPPST 59
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 58 ASKDAA 41
+ A+
Sbjct: 201 SHTHAS 206
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 235 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRXXSTSAAAGVGLPPST 59
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 58 ASKDAA 41
+ A+
Sbjct: 361 SHTHAS 366
>U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein.
Length = 264
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 220 DDSFSRPAAISCSTSLPLSSVITF-LSFSPSASIPTELRXXSTSAAAGVGLPPSTASKDA 44
D RP AISC ++ SS I + + F S+ +P + ST+A G + A DA
Sbjct: 126 DSGGIRPCAISCDKNVTTSSAICWHMGFWLSSILPASGKLVSTTATIFFGSDLNIAGTDA 185
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 GKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 227
G TP V+ +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 GKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 227
G TP V+ +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 GKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 227
G TP V+ +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence
similarity 55, member C protein.
Length = 559
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 3 RFVSIXP*KMRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKV 155
RF ++ ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein.
Length = 559
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 3 RFVSIXP*KMRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKV 155
RF ++ ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
Length = 559
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 3 RFVSIXP*KMRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKV 155
RF ++ ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 175 LPLSSVITF-LSFSPSASIPTELRXXSTSAAAGVGLPPSTASKD 47
LPL V T L+ PS+S+PT LR S S PP+T + +
Sbjct: 775 LPLPGVSTIPLTMKPSSSLPTILRTSSKSTHPS---PPTTRTSE 815
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 175 LPLSSVITF-LSFSPSASIPTELRXXSTSAAAGVGLPPSTASKD 47
LPL V T L+ PS+S+PT LR S S PP+T + +
Sbjct: 775 LPLPGVSTIPLTMKPSSSLPTILRTSSKSTHPS---PPTTRTSE 815
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 175 LPLSSVITF-LSFSPSASIPTELRXXSTSAAAGVGLPPSTASKD 47
LPL V T L+ PS+S+PT LR S S PP+T + +
Sbjct: 435 LPLPGVSTIPLTMKPSSSLPTILRTSSKSTHPS---PPTTRTSE 475
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 175 LPLSSVITF-LSFSPSASIPTELRXXSTSAAAGVGLPPSTASKD 47
LPL V T L+ PS+S+PT LR S S PP+T + +
Sbjct: 435 LPLPGVSTIPLTMKPSSSLPTILRTSSKSTHPS---PPTTRTSE 475
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,028,088
Number of Sequences: 237096
Number of extensions: 716937
Number of successful extensions: 2016
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2015
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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