Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_L09
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12556-1|CAA73146.1| 270|Homo sapiens 5'-AMP-activated protein ... 144 4e-34
U87276-1|AAD00625.1| 270|Homo sapiens AMP-activated protein kin... 144 4e-34
U83994-1|AAD09237.1| 270|Homo sapiens AMP-activated protein kin... 144 4e-34
BC017671-1|AAH17671.1| 270|Homo sapiens protein kinase, AMP-act... 144 4e-34
BC001823-1|AAH01823.1| 270|Homo sapiens protein kinase, AMP-act... 144 4e-34
BC001056-1|AAH01056.1| 270|Homo sapiens protein kinase, AMP-act... 144 4e-34
BC001007-1|AAH01007.1| 270|Homo sapiens protein kinase, AMP-act... 144 4e-34
AJ224515-1|CAA12024.1| 270|Homo sapiens AMP-activated protein k... 144 4e-34
AC002563-1|AAB71326.1| 282|Homo sapiens WUGSC:H_127H14.2 protein. 144 4e-34
BC053610-1|AAH53610.1| 272|Homo sapiens protein kinase, AMP-act... 139 1e-32
AL356378-1|CAH72644.1| 272|Homo sapiens protein kinase, AMP-act... 139 1e-32
AJ224538-1|CAA12030.1| 272|Homo sapiens AMP-activated protein k... 139 1e-32
AF504543-1|AAM74153.1| 272|Homo sapiens AMPK beta-2 subunit pro... 139 1e-32
AF022116-1|AAC98897.1| 248|Homo sapiens 5'-AMP-activated protei... 94 4e-19
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 33 1.5
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 33 1.5
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 33 1.5
D49394-1|BAA08387.1| 478|Homo sapiens serotonin 5-HT3 receptor ... 31 3.4
BT007204-1|AAP35868.1| 484|Homo sapiens 5-hydroxytryptamine (se... 31 3.4
BC004453-1|AAH04453.2| 478|Homo sapiens 5-hydroxytryptamine (se... 31 3.4
BC002354-1|AAH02354.1| 478|Homo sapiens 5-hydroxytryptamine (se... 31 3.4
AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase s... 31 3.4
AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase s... 31 3.4
AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase s... 31 3.4
AJ005205-1|CAA06442.3| 478|Homo sapiens serotonin 3 receptor pr... 31 3.4
AJ003080-1|CAA05853.1| 238|Homo sapiens serotonin receptor prot... 31 3.4
AJ003079-1|CAA05852.1| 478|Homo sapiens 5-hydroxytryptamine3 re... 31 3.4
AJ003078-1|CAA05851.1| 510|Homo sapiens serotonin receptor prot... 31 3.4
AF498984-1|AAM21131.1| 478|Homo sapiens 5-hydroxytryptamine rec... 31 3.4
BC021565-1|AAH21565.1| 465|Homo sapiens sorting nexin 8 protein. 31 4.5
BC007785-1|AAH07785.2| 459|Homo sapiens SNX8 protein protein. 31 4.5
AF121858-1|AAD27831.1| 465|Homo sapiens sorting nexin 8 protein. 31 4.5
>Y12556-1|CAA73146.1| 270|Homo sapiens 5'-AMP-activated protein
kinase beta-1 protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>U87276-1|AAD00625.1| 270|Homo sapiens AMP-activated protein kinase
beta subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>U83994-1|AAD09237.1| 270|Homo sapiens AMP-activated protein kinase
beta subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>BC017671-1|AAH17671.1| 270|Homo sapiens protein kinase,
AMP-activated, beta 1 non-catalytic subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>BC001823-1|AAH01823.1| 270|Homo sapiens protein kinase,
AMP-activated, beta 1 non-catalytic subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>BC001056-1|AAH01056.1| 270|Homo sapiens protein kinase,
AMP-activated, beta 1 non-catalytic subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>BC001007-1|AAH01007.1| 270|Homo sapiens protein kinase,
AMP-activated, beta 1 non-catalytic subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>AJ224515-1|CAA12024.1| 270|Homo sapiens AMP-activated protein
kinase, beta 1 subunit protein.
Length = 270
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 248
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 249 MVLSATHRYKKKYVTTLLYKPI 270
>AC002563-1|AAB71326.1| 282|Homo sapiens WUGSC:H_127H14.2 protein.
Length = 282
Score = 144 bits (348), Expect = 4e-34
Identities = 67/82 (81%), Positives = 71/82 (86%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKDGV
Sbjct: 201 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGV 260
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 261 MVLSATHRYKKKYVTTLLYKPI 282
>BC053610-1|AAH53610.1| 272|Homo sapiens protein kinase,
AMP-activated, beta 2 non-catalytic subunit protein.
Length = 272
Score = 139 bits (336), Expect = 1e-32
Identities = 64/82 (78%), Positives = 70/82 (85%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE+ + E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKD V
Sbjct: 191 QEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSV 250
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 251 MVLSATHRYKKKYVTTLLYKPI 272
>AL356378-1|CAH72644.1| 272|Homo sapiens protein kinase,
AMP-activated, beta 2 non-catalytic subunit protein.
Length = 272
Score = 139 bits (336), Expect = 1e-32
Identities = 64/82 (78%), Positives = 70/82 (85%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE+ + E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKD V
Sbjct: 191 QEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSV 250
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 251 MVLSATHRYKKKYVTTLLYKPI 272
>AJ224538-1|CAA12030.1| 272|Homo sapiens AMP-activated protein
kinase beta 2 subunit protein.
Length = 272
Score = 139 bits (336), Expect = 1e-32
Identities = 64/82 (78%), Positives = 70/82 (85%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE+ + E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKD V
Sbjct: 191 QEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSV 250
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 251 MVLSATHRYKKKYVTTLLYKPI 272
>AF504543-1|AAM74153.1| 272|Homo sapiens AMPK beta-2 subunit
protein.
Length = 272
Score = 139 bits (336), Expect = 1e-32
Identities = 64/82 (78%), Positives = 70/82 (85%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
QE+ + E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSIKD V
Sbjct: 191 QEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSV 250
Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
MVLSATHRY+KKYVTTLLY PI
Sbjct: 251 MVLSATHRYKKKYVTTLLYKPI 272
>AF022116-1|AAC98897.1| 248|Homo sapiens 5'-AMP-activated protein
kinase beta-1 protein.
Length = 248
Score = 94.3 bits (224), Expect = 4e-19
Identities = 43/57 (75%), Positives = 47/57 (82%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIK 680
QE KP E+ PPILPPHLLQVILNKDT +SC+P LLPEPNHVMLNHLYALSI+
Sbjct: 189 QEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIQ 245
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4075 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4109
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 1113 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 1147
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 543 VSGPPILPPHLLQVILNKDTP--LSCEPTLLPEPN 641
V PP++ PHL + ++ D P LSCE LP P+
Sbjct: 4076 VQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPD 4110
>D49394-1|BAA08387.1| 478|Homo sapiens serotonin 5-HT3 receptor
protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>BT007204-1|AAP35868.1| 484|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 3A protein.
Length = 484
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 90 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 137
>BC004453-1|AAH04453.2| 478|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 3A protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>BC002354-1|AAH02354.1| 478|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 3A protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 580 CKRCGGNIGGPDTFSHGLDCGISCFPPPSHLKTVGNTLI 464
C CG + G + F + +CG SC P H T GNT +
Sbjct: 623 CTSCGADNYGREHFLYQGECGDSC--PEGHYATEGNTCL 659
>AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 580 CKRCGGNIGGPDTFSHGLDCGISCFPPPSHLKTVGNTLI 464
C CG + G + F + +CG SC P H T GNT +
Sbjct: 623 CTSCGADNYGREHFLYQGECGDSC--PEGHYATEGNTCL 659
>AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 580 CKRCGGNIGGPDTFSHGLDCGISCFPPPSHLKTVGNTLI 464
C CG + G + F + +CG SC P H T GNT +
Sbjct: 623 CTSCGADNYGREHFLYQGECGDSC--PEGHYATEGNTCL 659
>AJ005205-1|CAA06442.3| 478|Homo sapiens serotonin 3 receptor
protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>AJ003080-1|CAA05853.1| 238|Homo sapiens serotonin receptor
protein.
Length = 238
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>AJ003079-1|CAA05852.1| 478|Homo sapiens 5-hydroxytryptamine3
receptor protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>AJ003078-1|CAA05851.1| 510|Homo sapiens serotonin receptor
protein.
Length = 510
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>AF498984-1|AAM21131.1| 478|Homo sapiens 5-hydroxytryptamine
receptor 3A protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 572 VWWQYWWTRHFLPWFGL-WDFLFSTSFPFENCW*YFNIVDYFTTIGES 432
+W++ +WT FL W +D + S P ++ W +++ F +G+S
Sbjct: 84 IWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKS 131
>BC021565-1|AAH21565.1| 465|Homo sapiens sorting nexin 8 protein.
Length = 465
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHL 662
Q++P + G P+L H LQ +L +DT + L+PE + L H+
Sbjct: 46 QQVPAPSRMQMPQGNPLLLSHTLQELLARDT---VQVELIPEKKGLFLKHV 93
>BC007785-1|AAH07785.2| 459|Homo sapiens SNX8 protein protein.
Length = 459
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHL 662
Q++P + G P+L H LQ +L +DT + L+PE + L H+
Sbjct: 40 QQVPAPSRMQMPQGNPLLLSHTLQELLARDT---VQVELIPEKKGLFLKHV 87
>AF121858-1|AAD27831.1| 465|Homo sapiens sorting nexin 8 protein.
Length = 465
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHL 662
Q++P + G P+L H LQ +L +DT + L+PE + L H+
Sbjct: 46 QQVPAPSRMQMPQGNPLLLSHTLQELLARDT---VQVELIPEKKGLFLKHV 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,282,804
Number of Sequences: 237096
Number of extensions: 2464700
Number of successful extensions: 5583
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 5123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5583
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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