Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L09
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81550-1|CAB04480.1|  269|Caenorhabditis elegans Hypothetical pr...   142   2e-34
AL117202-12|CAB55074.1|  274|Caenorhabditis elegans Hypothetical...   133   1e-31
AL161712-8|CAC70133.1|  340|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U00047-4|AAA50690.1|  825|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z78413-4|CAB01664.1|  329|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z81550-1|CAB04480.1|  269|Caenorhabditis elegans Hypothetical
           protein F55F3.1 protein.
          Length = 269

 Score =  142 bits (345), Expect = 2e-34
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = +3

Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
           QE P    + K + PP+LPPHLLQVILNKDTP+ C+P +LPEP+HVMLNHLYALSIKDGV
Sbjct: 188 QETPTRVDFNKAAAPPVLPPHLLQVILNKDTPVQCDPNVLPEPDHVMLNHLYALSIKDGV 247

Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
           MVLSATHRYRKK+VTTLLY PI
Sbjct: 248 MVLSATHRYRKKFVTTLLYKPI 269


>AL117202-12|CAB55074.1|  274|Caenorhabditis elegans Hypothetical
           protein Y47D3A.15 protein.
          Length = 274

 Score =  133 bits (321), Expect = 1e-31
 Identities = 57/82 (69%), Positives = 69/82 (84%)
 Frame = +3

Query: 510 QEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGV 689
           QEIP      K +GPP++PP L+QV+LNK+TP SC+P +LPEPNHVMLNH+YALSIKD V
Sbjct: 193 QEIPSMDMLRKAAGPPVIPPQLMQVLLNKETPESCDPNVLPEPNHVMLNHMYALSIKDSV 252

Query: 690 MVLSATHRYRKKYVTTLLYXPI 755
           MVLS+T RYRKK+VTTLLY P+
Sbjct: 253 MVLSSTQRYRKKFVTTLLYKPV 274


>AL161712-8|CAC70133.1|  340|Caenorhabditis elegans Hypothetical
           protein Y66D12A.11 protein.
          Length = 340

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 495 EGGGKQEIPQSKP-WEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVML 653
           E  G +  P+S P  + +  PP+ PP  +   ++   PL  +P   P+PN ++L
Sbjct: 199 EPEGVEVTPESFPDLQIMKPPPVSPPSNISEQIHHQPPLVPQPESRPDPNLIIL 252


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 571 CGGNIGGPDTFSHGLDCGISCFPPP 497
           CGG  GG      G  CG  C PPP
Sbjct: 32  CGGGCGGGGGCGGGGGCGGGCAPPP 56


>U00047-4|AAA50690.1|  825|Caenorhabditis elegans Hypothetical
           protein ZK418.6 protein.
          Length = 825

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 519 PQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVML 653
           P+S   + +  PP+ PP  +  +++    L  +P   P+PN ++L
Sbjct: 674 PRSPGLQIMKPPPVSPPSNIPELIHHQPALVTQPESRPDPNLIIL 718


>Z78413-4|CAB01664.1|  329|Caenorhabditis elegans Hypothetical
           protein T01C3.4 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 634 SGSRVG--SQESGVSLLSITCKRCGGNIGGPDTFSHGLDCGISCFPPP 497
           SG+  G  + E G + L  TC R  G   G     + LDCG++  P P
Sbjct: 194 SGANYGLCNCEGGSATLEKTCNRVNGLWPGDSCGLNYLDCGLTPLPWP 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,142,420
Number of Sequences: 27780
Number of extensions: 377754
Number of successful extensions: 1159
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)