Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L06
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 747  CAENVYPPLPAKVTIFLHL*EGEY 676
            C+EN +   P   T +LH   G+Y
Sbjct: 1279 CSENAFAAYPGDCTRYLHCLWGKY 1302


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 737 TFILHSRLKLQYFCTCEKGNIVTFSGFAFSVTTW 636
           TF + S+L L    T  K  + TFS   F  T W
Sbjct: 379 TFHIGSQLVLHTVKTVLKTTMSTFSDITFMRTVW 412


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +1

Query: 337 TPEITDYFGKDGLGDSGDVYPDLVPPHTENAVNALIHLSKTHEGNLTIIT 486
           TPEI  Y  K+G   + D + DL   +   ++ A   +++  +  + + T
Sbjct: 389 TPEIITYLEKNGKPRTTDTFLDLWSDYQNKSLAAFDFVARNSDTPIILWT 438


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 637 HVVTENANPEKVTIFPFSQVQ 699
           H+V     P +V  FPF + Q
Sbjct: 157 HLVRVGTEPRRVISFPFPETQ 177


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 372 PRRQWGCLPRSGTAAYRKCRQCSYTSV 452
           PRR+W   P +  A+    R   Y+SV
Sbjct: 121 PRREWSSPPDARAASDAARRGVLYSSV 147


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -3

Query: 477 GKVAFMCLRQMYKSIDGIFCMRRYQIWVDIPTVSEAVFTEVVRD 346
           G V F   R  ++     FC+    I+  +P +   V+T    D
Sbjct: 301 GLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATYD 344


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -3

Query: 477 GKVAFMCLRQMYKSIDGIFCMRRYQIWVDIPTVSEAVFTEVVRD 346
           G V F   R  ++     FC+    I+  +P +   V+T    D
Sbjct: 26  GLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATYD 69


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 372 PRRQWGCLPRSGTAAYRKCRQCSYTSV 452
           PRR+W   P +  A+    R   Y+SV
Sbjct: 277 PRREWSSPPDARAASDAARRGVLYSSV 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,760
Number of Sequences: 336
Number of extensions: 3767
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)