Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_L04
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 128 4e-30
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 128 4e-30
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 109 2e-24
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 109 2e-24
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 108 3e-24
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 108 3e-24
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 99 2e-21
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 99 2e-21
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 80 2e-15
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 78 5e-15
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 78 5e-15
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 67 9e-12
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 62 2e-10
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 61 6e-10
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 45 5e-05
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 44 9e-05
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 41 9e-04
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 40 0.001
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 40 0.001
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 38 0.006
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 33 0.17
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 30 1.2
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 29 3.7
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 29 3.7
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 28 6.5
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 28 6.5
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 27 8.6
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 128 bits (308), Expect = 4e-30
Identities = 62/141 (43%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
Frame = +1
Query: 166 RQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 345
R++ ++ +R SNVF+MF Q Q+ EFKEAF ++D ++DG I + DL+ F SLG+
Sbjct: 4 RKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEV 63
Query: 346 SEKELDEMVGEASG--PINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE--GKIDSER 513
+E+ +D M+ EA G PINFT LTLF +++ G+D +V+ NAF+ FDE+ GK++ E
Sbjct: 64 TEQFIDSMINEAPGAQPINFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEH 122
Query: 514 LRHALMTWGDKFSADEVDEAY 576
LR L T G+++S ++VDE +
Sbjct: 123 LRELLTTMGERYSEEQVDELF 143
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 253 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQL-LTLFANR 429
+ AFQ D D G + + LR ++G SE+++DE+ +A PI Q F
Sbjct: 104 RNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDA--PIKGGQFDYVEFTRM 161
Query: 430 MSGGSDEXD 456
+ G+ + D
Sbjct: 162 LKHGTKDKD 170
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 128 bits (308), Expect = 4e-30
Identities = 62/141 (43%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
Frame = +1
Query: 166 RQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 345
R++ ++ +R SNVF+MF Q Q+ EFKEAF ++D ++DG I + DL+ F SLG+
Sbjct: 4 RKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEV 63
Query: 346 SEKELDEMVGEASG--PINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE--GKIDSER 513
+E+ +D M+ EA G PINFT LTLF +++ G+D +V+ NAF+ FDE+ GK++ E
Sbjct: 64 TEQFIDSMINEAPGAQPINFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEH 122
Query: 514 LRHALMTWGDKFSADEVDEAY 576
LR L T G+++S ++VDE +
Sbjct: 123 LRELLTTMGERYSEEQVDELF 143
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 253 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQL-LTLFANR 429
+ AFQ D D G + + LR ++G SE+++DE+ +A PI Q F
Sbjct: 104 RNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDA--PIKGGQFDYVEFTRM 161
Query: 430 MSGGSDEXD 456
+ G+ + D
Sbjct: 162 LKHGTKDKD 170
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 109 bits (261), Expect = 2e-24
Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Frame = +1
Query: 169 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 348
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 349 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE--GKIDSERLRH 522
+ ++D M+ EASGPINFT LTLF R++ G+D +I AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIK 120
Query: 523 ALMT-WGDKFSADEVDEAY 576
L G+ DEV Y
Sbjct: 121 ILQNKRGEPLDEDEVKAMY 139
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 109 bits (261), Expect = 2e-24
Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Frame = +1
Query: 169 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 348
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 349 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE--GKIDSERLRH 522
+ ++D M+ EASGPINFT LTLF R++ G+D +I AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIK 120
Query: 523 ALMT-WGDKFSADEVDEAY 576
L G+ DEV Y
Sbjct: 121 ILQNKRGEPLDEDEVKAMY 139
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 108 bits (260), Expect = 3e-24
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Frame = +1
Query: 169 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 348
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 349 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE--GKIDSERLRH 522
+ ++D M+ EASGPINFT LTLF R++ G+D ++ AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIK 120
Query: 523 ALMT-WGDKFSADEVDEAY 576
L G+ DEV Y
Sbjct: 121 ILQNKRGEPLDEDEVKAMY 139
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 108 bits (260), Expect = 3e-24
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Frame = +1
Query: 169 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 348
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 349 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE--GKIDSERLRH 522
+ ++D M+ EASGPINFT LTLF R++ G+D ++ AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIK 120
Query: 523 ALMT-WGDKFSADEVDEAY 576
L G+ DEV Y
Sbjct: 121 ILQNKRGEPLDEDEVKAMY 139
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 99.1 bits (236), Expect = 2e-21
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Frame = +1
Query: 229 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 396
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 397 FTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 570
F + LT+ A +M +D + + AF+ FD++G I + LRH + G+K + +EVDE
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 571 AYDQMDIDDKGYIXTTKLIAMLT 639
+ DID G + + + M+T
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 99.1 bits (236), Expect = 2e-21
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Frame = +1
Query: 229 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 396
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 397 FTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 570
F + LT+ A +M +D + + AF+ FD++G I + LRH + G+K + +EVDE
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 571 AYDQMDIDDKGYIXTTKLIAMLT 639
+ DID G + + + M+T
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 79.8 bits (188), Expect = 2e-15
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Frame = +1
Query: 193 AKRTGSNV--FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 366
+K+T V F +++++ E+K AF+L D D +G I +L SLG+ +E+EL +
Sbjct: 16 SKQTNEPVSGFDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLD 75
Query: 367 MVGE----ASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHAL 528
MV E SG I+F + + RM+ +D +++ AF+ FD +G I ++ R+ +
Sbjct: 76 MVNEVDIDGSGTIDFGEFCQMM-KRMNKENDS-EMIREAFRVFDRDGNGFITADEFRYFM 133
Query: 529 MTWGDKFSADEVDEAYDQMDIDDKGYIXTTKLIAMLTA 642
GD+FS EVDE ++DID G I + + +A
Sbjct: 134 THMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 79.8 bits (188), Expect = 2e-15
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Frame = +1
Query: 193 AKRTGSNV--FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 366
+K+T V F +++++ E+K AF+L D D +G I +L SLG+ +E+EL +
Sbjct: 16 SKQTNEPVSGFDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLD 75
Query: 367 MVGE----ASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHAL 528
MV E SG I+F + + RM+ +D +++ AF+ FD +G I ++ R+ +
Sbjct: 76 MVNEVDIDGSGTIDFGEFCQMM-KRMNKENDS-EMIREAFRVFDRDGNGFITADEFRYFM 133
Query: 529 MTWGDKFSADEVDEAYDQMDIDDKGYIXTTKLIAMLTA 642
GD+FS EVDE ++DID G I + + +A
Sbjct: 134 THMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 78.2 bits (184), Expect = 5e-15
Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Frame = +1
Query: 211 NVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE---- 378
++ + +++ EF+EAF + D D +G I +L SLG+ +E+E+ EM+ E
Sbjct: 70 DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDID 129
Query: 379 ASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFS 552
+G I F + + M + +++ AF+ FD++G I ++ R+ ++ G +FS
Sbjct: 130 GNGQIEFPEFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFS 187
Query: 553 ADEVDEAYDQMDIDDKGYIXTTKLIAMLT 639
+EVDE ++D+D G I + + M++
Sbjct: 188 EEEVDEMIKEVDVDGDGEIDYEEFVKMMS 216
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 78.2 bits (184), Expect = 5e-15
Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Frame = +1
Query: 211 NVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE---- 378
++ + +++ EF+EAF + D D +G I +L SLG+ +E+E+ EM+ E
Sbjct: 13 DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDID 72
Query: 379 ASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFS 552
+G I F + + M + +++ AF+ FD++G I ++ R+ ++ G +FS
Sbjct: 73 GNGQIEFPEFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFS 130
Query: 553 ADEVDEAYDQMDIDDKGYIXTTKLIAMLT 639
+EVDE ++D+D G I + + M++
Sbjct: 131 EEEVDEMIKEVDVDGDGEIDYEEFVKMMS 159
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 67.3 bits (157), Expect = 9e-12
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Frame = +1
Query: 226 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPI 393
F+ +++ EF +AF+L D D + + +L LG +E+EL MV E +G I
Sbjct: 17 FTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKI 76
Query: 394 NFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVD 567
+F + + M+ +D+ +++ AFK FD++G I ++ +H + T G++FS +EVD
Sbjct: 77 DFGEFCKMM-KEMNKETDQ-ELIRLAFKVFDKDGNGYITAQEFKHFMTTMGERFSEEEVD 134
Query: 568 EAYDQMDIDDKGYIXTTKLIAML 636
E ++D D I + + M+
Sbjct: 135 EIIREVDKDGDEQIDLDEFVNMV 157
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 62.5 bits (145), Expect = 2e-10
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Frame = +1
Query: 214 VFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EA 381
V S +++++ EFKEAF L D D +G I +L +LG+ +E+++ E++ +
Sbjct: 19 VISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDG 78
Query: 382 SGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSA 555
+G + F + + M + +++ AFK FD +G I + + ++ G F
Sbjct: 79 NGQVEFPEFCVMMKRIMK--ETDSEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136
Query: 556 DEVDEAYDQMDIDDKGYIXTTKLIAMLT 639
EV+E +++D D G I + + + +
Sbjct: 137 VEVEEMMNEVDCDGNGEIDYEEFVKIFS 164
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Frame = +1
Query: 226 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPI 393
+S++++ E+++ F + D D+ G I ++L A +LG + ELD+++ E + I
Sbjct: 50 YSEEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQRGNHQI 109
Query: 394 NFTQLLTLFANRMSGGSDEXDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVD 567
+F + + S+ +VV F FD E G I + R L GD +D
Sbjct: 110 DFDEFCVVMRRLTMKKSNWNEVVKECFTVFDRSENGGISKKDFRFILRELGDITDNQIID 169
Query: 568 EAYDQMDIDDKGYI 609
E +++ D+D G I
Sbjct: 170 EIFNEADVDGNGVI 183
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +1
Query: 358 LDEMVGEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGK--IDSERLRHALM 531
++E+ + +G I+F + LT+ A +M G +D + + AF+ FD++G I + LRH +
Sbjct: 2 INEVDADGNGTIDFPEFLTVMARKMKG-TDSEEEIREAFRVFDKDGNGFISAAELRHVMT 60
Query: 532 TWGDKFSADEVDEAYDQMDIDDKGYI 609
G+K + +EVDE + DID G I
Sbjct: 61 NLGEKLTDEEVDEMIREADIDGDGQI 86
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 247 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 381
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 34 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 78
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/154 (22%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Frame = +1
Query: 172 SSRGSRKAKRTGSNVFSM-FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 348
SSRG+ ++++ M +++K++ E+++ F + D D G IG +L+ S+G A+
Sbjct: 26 SSRGTIHSQQSQPEDIQMKYTRKELKEYRQLFNMFDTDGSGAIGNEELKQAMISIGLHAN 85
Query: 349 EKELDEMVGE----ASGPINFTQLLTLFANRMS-GGSDEXDVVINAFKTFDEE--GKIDS 507
+ E+D ++ E +G I+F + + S +++ F+ FD++ G I
Sbjct: 86 KAEIDNVIKEVDADGNGEIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITE 145
Query: 508 ERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYI 609
++ +GD F + ++ + ++D+ G++
Sbjct: 146 NEFKYIAKEFGD-FDDELAEKVFRELDVSANGHL 178
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 50.8 bits (116), Expect = 8e-07
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Frame = +1
Query: 244 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 411
AE +E F+ D + DG I + +L LG AS +++ M+ +A +G I+ + L
Sbjct: 7 AEIREVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFL 66
Query: 412 TLFANRMSGGSDEXDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQM 585
+ ++ +E ++ + F FD+ +G I + L + G+K + E E Q
Sbjct: 67 NVLRRQICDPKEERELR-DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQG 125
Query: 586 DIDDKGYIXTTKLIAML 636
D+D G I + + ++
Sbjct: 126 DLDHDGMIDFQEFVNII 142
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 235 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFT 402
K+ E ++ F + D + DG+I +DL LG +E E EM+ + G I+F
Sbjct: 77 KEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQ 136
Query: 403 QLLTL 417
+ + +
Sbjct: 137 EFVNI 141
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 44.8 bits (101), Expect = 5e-05
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Frame = +1
Query: 247 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLT 414
+ K F+ D + DG I + +LRA +G+ +E ELD M A G I+F + L
Sbjct: 22 DLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLV 81
Query: 415 LF-ANRMSGGSDEXDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDI 591
+ AN +S ++ D +G I LR A G S ++ Y +D
Sbjct: 82 IAKANPLSLSLKAVFEELDV----DGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQ 137
Query: 592 DDKGYIXTTKLIAMLT 639
++ G I + M+T
Sbjct: 138 NNDGKINFQEFCEMMT 153
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 247 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 414
E +EAF+L D + +G I +DLR +L SE+ELDEM+ E SG ++F + +
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155
Query: 415 LFA 423
+ +
Sbjct: 156 MMS 158
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 247 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 414
E +EAF+L D + +G I +DLR +L SE+ELDEM+ E SG ++F + +
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155
Query: 415 LFA 423
+ +
Sbjct: 156 MMS 158
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 187 RKAKRTG-SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELD 363
+ AK+T SNV +++++ KE FQ +D D+ G I NDLR F + E+ L
Sbjct: 607 QNAKQTAVSNVALNLTKEEMQRAKERFQQLDKDRKGHITVNDLRKHFREHNQKIDERVLH 666
Query: 364 EMVGEA----SGPINFTQLLTLFANRMSG 438
E++ E +G I + L++ G
Sbjct: 667 ELLNEVDLNKNGEIEIAEFFQLYSGLKGG 695
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 187 RKAKRTG-SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELD 363
+ AK+T SNV +++++ KE FQ +D D+ G I NDLR F + E+ L
Sbjct: 607 QNAKQTAVSNVALNLTKEEMQRAKERFQQLDKDRKGHITVNDLRKHFREHNQKIDERVLH 666
Query: 364 EMVGEA----SGPINFTQLLTLFANRMSG 438
E++ E +G I + L++ G
Sbjct: 667 ELLNEVDLNKNGEIEIAEFFQLYSGLKGG 695
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +1
Query: 241 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EASGPINFTQLLT 414
+A+ +E F D D I + +LG+ +E E+ + VG + ++F +
Sbjct: 4 LADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVP 63
Query: 415 LFANRMSGGSDEXDV--VINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 570
+F + +S ++ V + FD+EG I+ LRH L T G++ S ++VD+
Sbjct: 64 IFQS-VSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQ 118
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 40.7 bits (91), Expect = 9e-04
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +1
Query: 217 FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASE---KELDEMVGE-AS 384
FS FS+KQ+ F F+ D D+D I N+L+ + LG + KEL + V E
Sbjct: 535 FSEFSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLGEAQTHIALKELIKKVDEDQD 594
Query: 385 GPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGKIDSE 510
G I+ + +F SG +V FKT E + E
Sbjct: 595 GKISQREFFLIFRLAASGELSCSEV----FKTLAESVDVSKE 632
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Frame = +1
Query: 253 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 405
KE F L D + DG I + + R A K MV +A+G + F +
Sbjct: 10 KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65
Query: 406 LLTLFANRMSGGSDEXDVV--INAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEA 573
L ++ +++ ++ K FD+E GKI + LRH L+ G++ SADE DE
Sbjct: 66 WLPMY-EQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADEL 124
Query: 574 YDQMDIDDKGYIXTTKLIAMLTA 642
++ D +G + I + A
Sbjct: 125 LKGVE-DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Frame = +1
Query: 253 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 405
KE F L D + DG I + + R A K MV +A+G + F +
Sbjct: 10 KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65
Query: 406 LLTLFANRMSGGSDEXDVV--INAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEA 573
L ++ +++ ++ K FD+E GKI + LRH L+ G++ SADE DE
Sbjct: 66 WLPMY-EQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADEL 124
Query: 574 YDQMDIDDKGYIXTTKLIAMLTA 642
++ D +G + I + A
Sbjct: 125 LKGVE-DGEGMVKYEDFIKKVLA 146
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 37.9 bits (84), Expect = 0.006
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Frame = +1
Query: 196 KRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV- 372
K + + + + ++ E+K AF D + DG I ++L G+ ++ EL ++
Sbjct: 112 KHAATQITASNCKNKIEEYKRAFNFFDANNDGRITIDELEKAMQKCGQKPTKLELRLIMY 171
Query: 373 ---GEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTF--DEEGKIDSERLRHAL--M 531
+ +G I F + L S D + F F D++G I+ + + +
Sbjct: 172 HGDNDQNGVITFDEFAHLMNGTASMNQYTYDQLREQFDMFDKDKDGFIEKMEMLSIVREL 231
Query: 532 TWGDKFSADEVDEAYDQMDIDDKGYI 609
+ F V++ +++ DID G I
Sbjct: 232 SLQASFPRQVVEQLFNEADIDGDGKI 257
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Frame = +1
Query: 247 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 414
+ E F L+D DKDG + +N++ A ++ + ELD + GE +G I+ + +
Sbjct: 23 QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRVELDFIFGEMDTDKTGKISKEEFVN 82
Query: 415 LFANRMSGGSDEXDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQMD 588
+ + ++ + F+ FD +G I + + L D + + + D
Sbjct: 83 YMKSPPIHRTTLRELEVQ-FRKFDSDGDGAITEDEMAEILRRTADLGDRAAISDMFKATD 141
Query: 589 IDDKGYIXTTKLIAML 636
++ G I + + M+
Sbjct: 142 LNGDGKITFFEFVKMM 157
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 35.9 bits (79), Expect = 0.025
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Frame = +1
Query: 268 LMDHDKDGIIGKNDLRATFDSLGRLASEKEL---DEMVGEASGPINFTQLL--TLFANRM 432
+ D D DG+I +D+ S G S+ EL E + +G ++F LL + A +
Sbjct: 1 MFDEDSDGLIETDDVSHVLRSFGLNPSQTELQLVSEQTAKKNGRVSFDDLLPRVVLAIQN 60
Query: 433 SGGSDEXDVVIN-AFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYI 609
D+ I+ AF+ + + L L + G+ + EV + + + I G I
Sbjct: 61 EEWKDDTPKQIHAAFQVITSNNYVQKDTLLQLLTSIGEPLTPQEVKQFLNHVSIRANGDI 120
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 235 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 381
K E ++ FQ +D D DG I +L+A +L +E+E+D+ + A
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSA 324
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 496 KIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIXTTKL 624
K +S L A++T+GD F+ VD +DID ++ T KL
Sbjct: 34 KFNSVELTSAMLTYGDLFNVTIVDLRSISIDIDLVKFLYTQKL 76
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 226 FSQKQVAEFKEAFQLMDHDKDGII-GKNDLRATFDSLGRLASEKELDEMVGEAS-GPINF 399
FSQKQ+ E +E F + G++ + LR SLG + + D + + PI F
Sbjct: 5 FSQKQIDEIRECFNF--YSTSGVLRTDSQLRCALRSLGYSPTASKTDIYFKKLNKKPIEF 62
Query: 400 TQLLTLFANRMSGGSDEXDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVDEA 573
L + + + + + +I A D + + S L L G++ S +E+
Sbjct: 63 ATFLDICKDEQNSPNPLTE-IIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEIKYL 121
Query: 574 YDQMDID 594
+++++
Sbjct: 122 LSKVEVN 128
>Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical
protein T15D6.4 protein.
Length = 424
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 394 NFTQLLTLFANRMSGGSDEXDVVINAFKTFDEEGKIDSERLRHALM 531
NF +++ ANRM G ++ +V+ F+T + E ++ + L L+
Sbjct: 171 NFAKMVKPVANRMIDGMNKQVLVVRRFETNETELPLNLDELEQGLL 216
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 259 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 366
AF+L D D+DG I +N++ + DS+ ++ S +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 259 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 366
AF+L D D+DG I +N++ + DS+ ++ S +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 3/130 (2%)
Frame = +1
Query: 229 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG-RLASEKELDEMVG--EASGPINF 399
++KQ+ EFK AF D +K+G + S G + E L E + + S
Sbjct: 227 TEKQLHEFKLAFDYFDQEKNGWLDYEHFELCLKSQGYNFSVESTLKETMSLLDPSTYEKH 286
Query: 400 TQLLTLFANRMSGGSDEXDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 579
+ + + + D+ + +A K D KI R + K A + + + D
Sbjct: 287 DYMRYMVKHETTNILDDHSAIEDALKNLDAR-KISDSMSRKEAEFFMSKI-AKKAETSSD 344
Query: 580 QMDIDDKGYI 609
Q+ ++ K ++
Sbjct: 345 QVCLEYKDFV 354
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 169 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI-IGKNDLRATFDSLGRLA 345
+ + S+ AKR+ N+FS+ V E + + M+ DKD + ++ D RL
Sbjct: 128 EDAEWSKNAKRSILNLFSLRKSAPVDEMNQDQKDMESDKDSVFFNVHEKTMEGDCRSRLH 187
Query: 346 SEKELDEMVGEASGPINFTQLLT 414
+E ++ + S +NF + +T
Sbjct: 188 IVQEGEKTIYTKS--VNFDKCIT 208
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 325 DSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEXDVVINAFKTFDEE 492
D LG+ A+ ++ VG+ + FT L LF ++ E D+ + ++ +E+
Sbjct: 186 DELGKFATMFSSNQEVGDHVRKMKFTLLNPLFVQKLFSNIKEGDIPVLMVRSGEEK 241
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 526 LMTWGDKFSADEVDE 570
L WGDK+S DE++E
Sbjct: 625 LQLWGDKYSIDEIEE 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.132 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,147,599
Number of Sequences: 27780
Number of extensions: 161540
Number of successful extensions: 616
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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