Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_L03
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    29   0.20 
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   2.5  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   3.3  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   7.6  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 687 ILXHYSRVSRSLWCKVYIH 631
           +L HY  +S S+WC +YI+
Sbjct: 257 LLLHYLHLSTSIWCFIYIY 275


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  VVAAGACSCHAPFCRLHFXNK-STCKV---SNPAIQCLKQC 130
           +V   +CSCH+  C + F  + STC     S  ++ C   C
Sbjct: 16  IVWLRSCSCHSSVCAVSFVMQCSTCNAPTDSANSVSCAGVC 56


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 123 NSAVSRF*HXITXFKASKLYNNXLNNMSRLIR 218
           +SA  R  H      A +LY++ L+N +RLIR
Sbjct: 15  SSAQGRSSHGRANPDAKRLYDDLLSNYNRLIR 46


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = -1

Query: 665 FPVLYGVRYIFIMSNTSSYFIKNIQIGYYSMVSIQDDIKYFHVWGTE 525
           F V+  V+Y+  + N+ +   +   +G Y M  +   + + H+  T+
Sbjct: 104 FSVIGTVKYLRYLMNSITQQSELFSLGRYEMFLVMSPLLFSHIASTK 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,160
Number of Sequences: 2352
Number of extensions: 14507
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)