Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_L02
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 60 2e-09
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 50 1e-06
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 48 6e-06
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 44 1e-04
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 37 0.015
04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798 30 1.7
03_05_0744 + 27336697-27337131,27337329-27337787,27340852-273424... 30 2.2
11_04_0401 - 17251759-17252208,17252545-17253022,17254235-172542... 29 2.9
11_01_0126 + 1021224-1021256,1021717-1022486,1022582-1022667,102... 29 3.9
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 29 3.9
01_06_0288 - 28228673-28228744,28228866-28229071,28229316-282295... 29 5.2
05_04_0257 + 19487757-19489070 28 6.8
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = -3
Query: 522 APGCDGIPYSFLQNLNDSCLSYFLSLINSILTSGNIPPSWKIHEVIPIHKPNKPINDPSS 343
+PG DG P F Q + S + + + SG +P ++ I K ++PI D
Sbjct: 908 SPGPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPI-DLKD 966
Query: 342 YRPIALASVISKICEHLVKNRLEWFIESKGLLSPNQFGFRKGRSTMD-SLSIF--MTDIR 172
YRPI+L +V+ K+ + NRL ++ L+S Q F +GR D +L F I+
Sbjct: 967 YRPISLCNVVYKVVSKCLVNRLRPILDD--LVSKEQSAFIQGRMITDNALLAFECFHSIQ 1024
Query: 171 LAFSYNKSVLAAFLDVSAAYDNVNLSVLK 85
N + A LD+S AYD V+ L+
Sbjct: 1025 KNKKANSAACAYKLDLSKAYDRVDWRFLE 1053
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 50.4 bits (115), Expect = 1e-06
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Frame = -3
Query: 456 FLSLINSILTSGNIPPSWKIHEVIPIHKPNKPINDPSSYRPIALASVISKICEHLVKNRL 277
F SL TSG ++ I KP K N YRPI+L + KI ++ RL
Sbjct: 951 FFSLATGFTTSGADIERINRAYIVLIQKPGKE-NTVDGYRPISLQNCSVKILSKVLATRL 1009
Query: 276 EWFIESKGLLSPNQFGFRKGRSTMDSLSIFMTD-IRLAFSYNKSVLAAFLDVSAAYDNVN 100
+ ++ +Q GF KGR ++L I+ T+ I+ + + LD + A+D+V
Sbjct: 1010 QRVFLR--MIHLDQTGFLKGRCISENL-IYATELIQACYRRKCQTIIVKLDFTKAFDSVI 1066
Query: 99 LSVLKQKMINLNIPQIFISFIINLLS 22
S L + + P+ +IS+I LLS
Sbjct: 1067 WSSLFKILAVRGFPENWISWIKGLLS 1092
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 48.4 bits (110), Expect = 6e-06
Identities = 38/164 (23%), Positives = 69/164 (42%)
Frame = -3
Query: 528 DSAPGCDGIPYSFLQNLNDSCLSYFLSLINSILTSGNIPPSWKIHEVIPIHKPNKPINDP 349
D APG DG F++ + L+ + +GN+ I + +
Sbjct: 327 DKAPGPDGFNGFFMKKCWHIIAQDYYRLV-AHFHAGNVDLEILNSSFITLVPKKTSLETV 385
Query: 348 SSYRPIALASVISKICEHLVKNRLEWFIESKGLLSPNQFGFRKGRSTMDSLSIFMTDIRL 169
+ +RPI+L + KI L+ RL+ I L+S N +GF KG++ D + I
Sbjct: 386 NDFRPISLMGISLKIVTKLLAGRLQGVILK--LVSDNHYGFIKGKTIQDCPAWPFEYIHQ 443
Query: 168 AFSYNKSVLAAFLDVSAAYDNVNLSVLKQKMINLNIPQIFISFI 37
+ ++ LD A+D + S + M ++ P +I ++
Sbjct: 444 CQQSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWV 487
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = -3
Query: 348 SSYRPIALASVISKICEHLVKNRLEWFIESKGLLSPNQFGFRKGRSTMDSLSIFMTDIRL 169
S +RPI+L +V+ KI ++ NRL+ F+ ++S Q F GR DS + +
Sbjct: 185 SKFRPISLCNVLYKIASKVLANRLKLFLPD--IVSEFQSAFVPGRLITDSSLVAYECLNT 242
Query: 168 --AFSYNKSVLAAFLDVSAAYDNVNLSVLKQKMINLNIPQIFISFIINLLS 22
S K A +D+ AYD + S L ++ L Q +I+ ++ ++
Sbjct: 243 IKKQSNKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVT 293
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 37.1 bits (82), Expect = 0.015
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -3
Query: 252 LLSPNQFGFRKGRSTMDSLSIFMTDIRLAFSYNK-SVLAAFLDVSAAYDNVNLSVLKQKM 76
++ +Q GF KGR ++L I+ T++ A K L LD + A+D+VN L Q +
Sbjct: 1 MIHMDQTGFLKGRCISENL-IYATELIQACHARKCQTLIIKLDFAKAFDSVNWQSLFQIL 59
Query: 75 INLNIPQIFISFIINLL 25
P +IS+I NLL
Sbjct: 60 SVKGFPDNWISWIKNLL 76
>04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798
Length = 575
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 521 AESLSLERTPLSSERLKEMNESLLSCWERREGCES 625
AE L L T L +ERLKE+ + L+ W+ + E+
Sbjct: 310 AEDLELGYTTLQNERLKEIEKLTLTSWKETDEIEN 344
>03_05_0744 +
27336697-27337131,27337329-27337787,27340852-27342418,
27342641-27343044
Length = 954
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 188 KMLRLSIVLLPFLNPNWLGDSNPLLSINHSSLFLTRCS 301
K L + + LPFL+ W+ + ++SI H LFL+ S
Sbjct: 760 KQLPVGLGQLPFLDYIWIDHAPSIVSIGHDLLFLSSSS 797
>11_04_0401 -
17251759-17252208,17252545-17253022,17254235-17254290,
17254489-17255019
Length = 504
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = -3
Query: 516 GCDGIPYSFLQNLNDSCLSYFLSLINSILTSGNIPPSWKIHEVIPIHKPNKPINDPSSYR 337
G +G P Q ++ + I +G P ++ I ++P+ D +R
Sbjct: 407 GPNGFPARIYQRNRGIMKQDIVNPVTKIFQTGLTPMGVNDTAIVLILMSDQPV-DLKDFR 465
Query: 336 PIALASVISKICEHLVKNRLEWFIE 262
PI+L +V+ K+ + NRL ++
Sbjct: 466 PISLCNVVYKVVFKCLVNRLRTVLD 490
>11_01_0126 +
1021224-1021256,1021717-1022486,1022582-1022667,
1024240-1024316,1025095-1025190,1025861-1026566,
1026732-1026775
Length = 603
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 137 AANTDLLYENANLMSVIKMLRLSIVLLPFLNPNWLGDSNPLLSINHSSLFLTRCSQILEI 316
AA TD +L S+ L + + + + NW G LSI + ++LT +LE+
Sbjct: 456 AAVTDWCISGFSLASLTNSLVVGMPMARAMYGNWAGQIVVQLSIFQAIVWLTSLVVVLEV 515
Query: 317 TEANAIGLYDDGS 355
+A +D+ +
Sbjct: 516 RKAFVSDAHDESN 528
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 467 QESFRF*RKEYGIPSQPGAESLSLERTPLSSERLKEMNESLLSCWERREGCESXXLLSID 646
++SFRF R+ YG+ + L L SE L + +++ R E L
Sbjct: 425 EKSFRFNRRGYGLQPVLNPTEMFLTEHDLDSEILAGLAVAVVLDGSRTFAIEVQALCVSG 484
Query: 647 GTNGG--ANLSRNKSTVLLSMKGDXGGLKADLN 739
G + RN++ +++S+ GLK N
Sbjct: 485 SPRNGEVVGIPRNRADIIISVLMKQAGLKLQDN 517
>01_06_0288 -
28228673-28228744,28228866-28229071,28229316-28229554,
28229649-28229705,28229787-28229873,28229963-28230507,
28231574-28231714
Length = 448
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 PLLSINHSSLFLTRCSQILEITEANAIGLYDDGSLMGLLGLCIGIT-SWIF 403
P+++I +S T C Q + + +G++ +++ LL +CI ++ W+F
Sbjct: 44 PMVAIGMASALETLCGQAYGAKQYHTLGVHTYRAILTLLVVCIPLSLLWVF 94
>05_04_0257 + 19487757-19489070
Length = 437
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3
Query: 543 LSRLRDSAPGCDGIPYSFLQNLNDSCLSYFLSLINSILTSGNIPPSWKIHEVIPIHKPNK 364
L++ A CDG P LND+C + + + + TSGN+ I +V+ + +
Sbjct: 99 LAKTNACATSCDGAPSPAC--LNDTCGGFPENTVTHVSTSGNV-----ITDVLSLPTTFR 151
Query: 363 PINDPSSYRPIAL 325
P P + P L
Sbjct: 152 PAPGPLATAPAFL 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,927,055
Number of Sequences: 37544
Number of extensions: 345740
Number of successful extensions: 878
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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