Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K19
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0227 - 15894357-15894494,15894587-15894655,15894837-158949...    56   4e-08

>12_02_0227 -
           15894357-15894494,15894587-15894655,15894837-15894902,
           15895130-15895219,15895312-15895408,15896449-15896771
          Length = 260

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
 Frame = +3

Query: 183 VHRVKE-EQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDI-PEKTEVDQKFLMKIM 356
           VH   E E+  + + S+LV +AY+TL +PL+R +Y+LQL G  I  EKT  D + LM++M
Sbjct: 135 VHSKSEKERAFAAEQSALVIDAYRTLSKPLSRALYLLQLEGIPIDEEKTITDPELLMEMM 194

Query: 357 XXXXXXXXXXXXXXXXXXXXXXXXKIQSLQXQLSTAFFEGDLKRVTKLLTQLKYY 521
                                   K+++       AF   D  R  K   +++YY
Sbjct: 195 EIREAVNDANDSQTLEKIQSQIKRKLETWSHSFQEAFERRDFDRAVKATQRMRYY 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,191,459
Number of Sequences: 37544
Number of extensions: 209933
Number of successful extensions: 343
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)