Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K19
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2165|AAN13700.1|  222|Drosophila melanogaster CG31287-P...    29   6.0  
AY061252-1|AAL28800.1|  280|Drosophila melanogaster LD18769p pro...    29   8.0  
AE014134-1724|AAF52829.1|  280|Drosophila melanogaster CG4594-PA...    29   8.0  

>AE014297-2165|AAN13700.1|  222|Drosophila melanogaster CG31287-PA
           protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = -3

Query: 216 QIFLVLL*LYEHIMTVDGNM*SSVQSCQVAQPSPRIGLQNYNISFKITTLNIVEKFYKYH 37
           Q+F +    Y+ ++++  +   +V  C   Q    +   N  IS K+ ++N+V K   YH
Sbjct: 105 QVFPLASTTYQDLLSMLMSSKKTVDHCN--QIKEEVATYNEQISAKVPSVNLVTKLIDYH 162

Query: 36  DHLL 25
           ++ L
Sbjct: 163 NNTL 166


>AY061252-1|AAL28800.1|  280|Drosophila melanogaster LD18769p
           protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 201 EQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEVDQK 338
           ++E  EK ++ +    K  + PLARG+  LQ RG +I E   + +K
Sbjct: 206 KEEALEKCAAFIGTFAK--VNPLARGLTKLQFRGDNIKEFEMIREK 249


>AE014134-1724|AAF52829.1|  280|Drosophila melanogaster CG4594-PA
           protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 201 EQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEVDQK 338
           ++E  EK ++ +    K  + PLARG+  LQ RG +I E   + +K
Sbjct: 206 KEEALEKCAAFIGTFAK--VNPLARGLTKLQFRGDNIKEFEMIREK 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,519,954
Number of Sequences: 53049
Number of extensions: 391509
Number of successful extensions: 811
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)