Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_K07
(838 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase su... 332 5e-90
UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole... 293 4e-78
UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase sm... 254 2e-66
UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,... 233 4e-60
UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot syn... 194 3e-48
UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1; ... 190 3e-47
UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase sm... 189 7e-47
UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1; ... 178 2e-43
UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase sm... 177 3e-43
UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase sm... 176 5e-43
UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Re... 170 3e-41
UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-1... 161 3e-38
UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1; ... 161 3e-38
UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;... 149 1e-34
UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole... 142 1e-32
UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1; ... 140 4e-32
UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase sm... 116 1e-24
UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;... 99 1e-19
UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa... 90 6e-17
UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n... 85 2e-15
UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;... 85 3e-15
UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep: ... 83 6e-15
UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase be... 83 8e-15
UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;... 77 7e-13
UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;... 75 2e-12
UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase be... 75 2e-12
UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2... 73 9e-12
UniRef50_Q8VB15 Cluster: Wsv190; n=1; Shrimp white spot syndrome... 70 6e-11
UniRef50_P20560 Cluster: Uncharacterized 8.3 kDa protein; n=3; O... 68 3e-10
UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4; ... 68 3e-10
UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n... 67 6e-10
UniRef50_A7IV34 Cluster: Putative uncharacterized protein m654R;... 66 8e-10
UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase be... 65 2e-09
UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3 protein/Ri... 65 2e-09
UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase su... 63 1e-08
UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n... 62 2e-08
UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;... 61 4e-08
UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase be... 60 9e-08
UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, b... 60 9e-08
UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent viru... 59 1e-07
UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, b... 58 2e-07
UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase be... 58 2e-07
UniRef50_Q8TGJ8 Cluster: Uncharacterized protein YJL026C-A; n=2;... 58 2e-07
UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase su... 57 6e-07
UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, b... 56 1e-06
UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1 ... 54 3e-06
UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase su... 54 3e-06
UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, b... 53 8e-06
UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep: Slr... 53 8e-06
UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;... 53 1e-05
UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage phiKZ|... 51 4e-05
UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase be... 50 5e-05
UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase be... 50 1e-04
UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep: Lm... 49 1e-04
UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2; Lymphocy... 48 2e-04
UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;... 48 3e-04
UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3... 46 9e-04
UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase sm... 46 0.001
UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, b... 46 0.002
UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase be... 45 0.003
UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;... 44 0.006
UniRef50_Q4J6V7 Cluster: Ribonucleoside-diphosphate reductase; n... 43 0.008
UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase su... 43 0.011
UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1; Pedoba... 42 0.025
UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate red... 41 0.044
UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain; ... 41 0.044
UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage 0... 40 0.077
UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase su... 40 0.10
UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,... 39 0.14
UniRef50_P55983 Cluster: Ribonucleoside-diphosphate reductase su... 39 0.14
UniRef50_Q6QGJ3 Cluster: Putative aerobic ribonucleoside diphosp... 39 0.18
UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 - ... 38 0.24
UniRef50_Q4J6S5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.41
UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;... 37 0.72
UniRef50_A7R4N6 Cluster: Chromosome undetermined scaffold_747, w... 37 0.72
UniRef50_A4L226 Cluster: Ribonucleotide reductase small subunit;... 36 1.3
UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|R... 36 1.3
UniRef50_A3I5A8 Cluster: Ribonucleotide-diphosphate; n=1; Bacill... 36 1.7
UniRef50_UPI000155436B Cluster: hypothetical protein ORF027; n=1... 35 2.9
UniRef50_A5FCJ5 Cluster: Ribonucleotide reductase; n=1; Flavobac... 35 2.9
UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1; Para... 34 5.1
UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia... 33 6.7
UniRef50_A3J9D7 Cluster: TRNA-dihydrouridine synthase A; n=1; Ma... 33 6.7
UniRef50_Q01LS0 Cluster: OSIGBa0139J17.4 protein; n=12; Oryza sa... 33 6.7
UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q95S88 Cluster: GM05661p; n=4; Sophophora|Rep: GM05661p... 33 6.7
UniRef50_Q8YTL8 Cluster: Sensor protein; n=2; Nostocaceae|Rep: S... 33 8.9
UniRef50_A3XHF9 Cluster: Ribonucleoside-diphosphate reductase, b... 33 8.9
UniRef50_A5B5F6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_O43272 Cluster: Proline oxidase, mitochondrial precurso... 33 8.9
>UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase
subunit M2; n=260; root|Rep: Ribonucleoside-diphosphate
reductase subunit M2 - Homo sapiens (Human)
Length = 389
Score = 332 bits (817), Expect = 5e-90
Identities = 151/196 (77%), Positives = 164/196 (83%)
Frame = +1
Query: 250 QKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFI 429
+ EPLLRENPRRFVIFPI+Y DIWQMYKKAEASFWT EEVDLSKD+ WE+LK ER+FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 430 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDP 609
HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMEN+HSEMYSLLIDTYI+DP
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 610 KERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLK 789
KER+FLFNA+ET+PCVKKKADWAL+WI K AT+GER WLK
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 790 KRGLMPGLTFXNELIS 837
KRGLMPGLTF NELIS
Sbjct: 248 KRGLMPGLTFSNELIS 263
>UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7053,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 369
Score = 293 bits (719), Expect = 4e-78
Identities = 130/156 (83%), Positives = 145/156 (92%)
Frame = +1
Query: 253 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIK 432
+EPLL+ENPRRFVIFPIQY D+WQMYKKAEASFWT EEVDLSKDL WE+LKD ER FI
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 433 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPK 612
HVLAFFAASDGIVNENLVERF+QEVQVTEARCFYGFQIAMEN+HSEMYSLLIDTYI++P
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPS 120
Query: 613 ERDFLFNAVETLPCVKKKADWALQWIASKTATFGER 720
ER++LFNA+ETLPCVKKKADWAL WI ++ A++GER
Sbjct: 121 EREYLFNAIETLPCVKKKADWALNWIGNQKASYGER 156
>UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=12; Eukaryota|Rep: Ribonucleoside-diphosphate
reductase small chain - Schizosaccharomyces pombe
(Fission yeast)
Length = 391
Score = 254 bits (623), Expect = 2e-66
Identities = 122/206 (59%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Frame = +1
Query: 220 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 399
L K +E D E +LR NP RFV+FPI+Y +IWQ YKKAEASFWT EE+DLSKDL DW+
Sbjct: 57 LGKKEDELD---EVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWD 113
Query: 400 T-LKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMY 576
L ER+FI VLA+FAASDGIVNENL+ERFS EVQ+ EARC YGFQI +EN+HSE Y
Sbjct: 114 NKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETY 173
Query: 577 SLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXX 756
SLL+DTYIR+PKE+ F+A+ T+ +K KA WAL+WI + +T+ R
Sbjct: 174 SLLLDTYIREPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFF 233
Query: 757 XXXXXXXXWLKKRGLMPGLTFXNELI 834
WLKKRGLMPGLTF NELI
Sbjct: 234 SGSFASIFWLKKRGLMPGLTFSNELI 259
>UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,
putative; n=1; Filobasidiella neoformans|Rep:
Ribonucleotide reductase small subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 430
Score = 233 bits (570), Expect = 4e-60
Identities = 112/219 (51%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Frame = +1
Query: 184 ATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVE 363
+ K N +E + + F E ++E +LRE+ RFV+FPI+Y +IWQ YK A+ASFWT E
Sbjct: 78 SNKGGNPAKEGKVTRKFPE--EEEEDILRESESRFVLFPIKYNEIWQAYKHAQASFWTAE 135
Query: 364 EVDLSKDLSDW-ETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGF 540
E+D DL DW + + + ER FI +LAFFAASDGIV EN+V +F+ EVQ+ EAR FY F
Sbjct: 136 ELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSF 195
Query: 541 QIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGER 720
Q +E VHSE YSLLI+TY+RD +E+DFLF + +PC+K+KADWAL++I + F R
Sbjct: 196 QSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMTNIPCIKQKADWALKYITDE-LPFRTR 254
Query: 721 XXXXXXXXXXXXXXXXXXXXWLKKRGLMPGLTFXNELIS 837
WLKKRGLMPGLTF NELIS
Sbjct: 255 LVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELIS 293
>UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot
syndrome virus|Rep: RR2 protein - White spot syndrome
virus (WSSV)
Length = 328
Score = 194 bits (472), Expect = 3e-48
Identities = 89/200 (44%), Positives = 115/200 (57%)
Frame = +1
Query: 238 EFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSE 417
+ D K L RENP RFV PI + D+W+MYKK A FWT+EE+D +D DWE L E
Sbjct: 27 QVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDE 86
Query: 418 RHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 597
+ FI +LAFFA+SDGIV ENL R Q Q+ EAR F+ FQ+ ME++H +Y LID
Sbjct: 87 KDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRL 146
Query: 598 IRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXX 777
+ D K++ LFNA + P +KKK WA+ W+ S E
Sbjct: 147 VPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNN-DLAELIVAFAAVEGIFFSGAFASI 205
Query: 778 XWLKKRGLMPGLTFXNELIS 837
W+K RG++PGLT NE IS
Sbjct: 206 FWIKNRGILPGLTSSNEFIS 225
>UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 244
Score = 190 bits (464), Expect = 3e-47
Identities = 85/105 (80%), Positives = 97/105 (92%)
Frame = +1
Query: 358 VEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYG 537
++EVDLSKDL+DWE LK E+HFI HVLAFF ASDG +NENLVERFSQE+QVTEARCFYG
Sbjct: 140 IKEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYG 199
Query: 538 FQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKAD 672
FQIAMENVHSEMYSLLIDTYIRD K+R++LFNA++ LPCVKKKA+
Sbjct: 200 FQIAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244
>UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Ribonucleoside-diphosphate reductase small chain -
Mimivirus
Length = 417
Score = 189 bits (461), Expect = 7e-47
Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 3/206 (1%)
Frame = +1
Query: 229 NFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-L 405
+FE KEP+L ++ + PI+Y +W YK ++WTVEEVDL+KD++DW L
Sbjct: 90 DFENDVIMKEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHL 149
Query: 406 KDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLL 585
D +R+FI HVLAFFAA+DGIVN N+ E V++ EA C YGFQ AMEN H EMYSL+
Sbjct: 150 SDDDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLM 209
Query: 586 IDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXX 765
+ T+++D R+ L N+++T+P +KKKADW +WI S T+ +
Sbjct: 210 LTTFVKDDALRNKLINSIKTMPSIKKKADWCNKWIKS-DKTYAHKLVAFSIVEGVFFSGS 268
Query: 766 XXXXXWLKKRGL--MPGLTFXNELIS 837
WLK R + MPGL N+ I+
Sbjct: 269 FASIFWLKTREMHVMPGLIISNQFIA 294
>UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 257
Score = 178 bits (433), Expect = 2e-43
Identities = 90/176 (51%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Frame = +1
Query: 313 DIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVNENLVE 489
DIW+MYKK A+ W VEE++ S D DWE L + ER F +VLAFF AS GI+N+NL
Sbjct: 86 DIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-N 144
Query: 490 RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 669
RF +VQ+ EA+CFY +QI ++ +HSE YSLLI+T I+D +D LFNA+ET+PCVKKKA
Sbjct: 145 RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKA 204
Query: 670 DWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLKKRGLMPGLTFXNELIS 837
+WAL+WI +F +R LKKR LM GLTF NELI+
Sbjct: 205 EWALKWI---NESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
>UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=2; African swine fever virus|Rep:
Ribonucleoside-diphosphate reductase small chain -
African swine fever virus (strain BA71V) (ASFV)
Length = 334
Score = 177 bits (431), Expect = 3e-43
Identities = 85/199 (42%), Positives = 112/199 (56%)
Frame = +1
Query: 241 FDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSER 420
F E LL EN +RF IFPIQ+P+ W YKK E+ WT +EVD+ KD+ DWE + +R
Sbjct: 4 FISNMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQR 63
Query: 421 HFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 600
F K +LAFF +D IV ENL+ F +E++V E FY Q A E VHSE YS+ + T I
Sbjct: 64 EFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLI 123
Query: 601 RDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXX 780
D KE+ +F+ +E P +KK A W QW+ T GER
Sbjct: 124 PDEKEQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQ 183
Query: 781 WLKKRGLMPGLTFXNELIS 837
+LK++ +MPGL NE IS
Sbjct: 184 FLKEQNIMPGLVSYNEFIS 202
>UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase small
chain 2; n=3; Saccharomycetales|Rep:
Ribonucleoside-diphosphate reductase small chain 2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 345
Score = 176 bits (429), Expect = 5e-43
Identities = 82/193 (42%), Positives = 119/193 (61%)
Frame = +1
Query: 256 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 435
E LL EN RRFV+FPI+Y +IW YKK EASFWT EE++L+KD D++ L D ++ +I +
Sbjct: 25 EILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGN 84
Query: 436 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 615
+LA +SD +VN+ L+E FS ++Q E + FYGFQI MEN++SE+YS+++D + +DPK
Sbjct: 85 LLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKN 144
Query: 616 RDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLKKR 795
LF + LP VK KA + +WI++ + + ER WL +
Sbjct: 145 IP-LFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDK 203
Query: 796 GLMPGLTFXNELI 834
+MPGL N I
Sbjct: 204 KIMPGLAMANRNI 216
>UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Rep:
At5g40942 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 170 bits (414), Expect = 3e-41
Identities = 82/131 (62%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +1
Query: 253 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFI 429
+EP+L P RF +FPIQYP IW+MYKKAEASFWT EEVDLS+D DWE +L + ERHFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 430 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDP 609
KHVLAFFAASDGIV ENL RF +VQ++EAR FYGFQIA+EN+HSE +L+ T +
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE---ILLRTKFDED 122
Query: 610 KERDFLFNAVE 642
+ + + +AVE
Sbjct: 123 RLKAIVCDAVE 133
>UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-128
- Ectocarpus siliculosus virus 1
Length = 419
Score = 161 bits (390), Expect = 3e-38
Identities = 79/189 (41%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Frame = +1
Query: 283 RFVIF----PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFF 450
RF++F +Y D++Q+YKK A FW VEE+DLS D DWE E+HF+K VLAFF
Sbjct: 105 RFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFF 164
Query: 451 AASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLF 630
A+ D IV EN+ F E+ + + R + Q A E VH E YSLLI TY RD +E+ +
Sbjct: 165 ASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVM 224
Query: 631 NAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLKKRGLMPG 810
+++T+P ++KKA WA +W+ +TA+ ER WLKKR G
Sbjct: 225 RSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKG 284
Query: 811 LTFXNELIS 837
L+F N LI+
Sbjct: 285 LSFANSLIA 293
>UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 351
Score = 161 bits (390), Expect = 3e-38
Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 3/188 (1%)
Frame = +1
Query: 256 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDW---ETLKDSERHF 426
E +L EN RRFV+FPI+Y +I+ YKK EA FWT EE+D SKD+ +W + KD + +F
Sbjct: 26 ESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEYF 85
Query: 427 IKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRD 606
I+ +LA FA++D + ENL E S E Q EA+CFYGFQI ++N+H E+Y +LID+ ++D
Sbjct: 86 IR-LLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKD 143
Query: 607 PKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWL 786
++R +F ++ L +K+K ++A W ++ FGE+
Sbjct: 144 DEKRTSMFEEIKDLTNIKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSF 203
Query: 787 KKRGLMPG 810
+K GL+PG
Sbjct: 204 QKGGLIPG 211
>UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;
n=1; Ecotropis obliqua NPV|Rep: Ribonucleotide reductase
small subunit - Ecotropis obliqua NPV
Length = 341
Score = 149 bits (360), Expect = 1e-34
Identities = 73/140 (52%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
Frame = +1
Query: 283 RFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHVLAFFAAS 459
R VI PI+ ++W+M K A W VEE DLS+D DW L ER F+KH+LAFFA++
Sbjct: 8 RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASA 67
Query: 460 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAV 639
D IVN NL++ V EAR FY QI +ENVHSEMYSLL+ YI++ +ER+ L NA
Sbjct: 68 DTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAF 127
Query: 640 ETLPCVKKKADWALQWIASK 699
+ + C+KKKA WAL+W SK
Sbjct: 128 DRIDCIKKKAQWALKWTESK 147
>UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3173,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 441
Score = 142 bits (344), Expect = 1e-32
Identities = 61/75 (81%), Positives = 71/75 (94%)
Frame = +1
Query: 484 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKK 663
VERF+QEVQVTEARCFYGFQIAMEN+HSEMYSLLIDTYI++P ER++LFNA+ETLPCVKK
Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293
Query: 664 KADWALQWIASKTAT 708
KADWAL WI ++ A+
Sbjct: 294 KADWALNWIGNQKAS 308
Score = 47.2 bits (107), Expect = 5e-04
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 255 GTSAAGEPAALCHLPYSIPRYMANVQES*SFVLDRRGSRF 374
G A GEPAAL HLP+ +P +A+VQE LDRRG R+
Sbjct: 107 GAPAEGEPAALRHLPHPVPGPLADVQEGGGVFLDRRGGRW 146
>UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 361
Score = 140 bits (339), Expect = 4e-32
Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
Frame = +1
Query: 196 DNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDL 375
D+ E+ + + E KEP+L EN RFV+ PI++ ++ YKK EA FW EE+D
Sbjct: 20 DSFLEKYKIHRLEVEESQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDF 79
Query: 376 SKDLSDW-ETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAM 552
S D+ +W + D ++ IK LAF +S + + L E S EVQ+ EA+CFYGF+I +
Sbjct: 80 SHDIINWGKKASDHDKSIIKKSLAFLCSSV-LGSFYLPEHISSEVQIPEAKCFYGFEIMV 138
Query: 553 ENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXX 732
EN+H E+YSL ID + + E +F V+ +++K +A +W +++ F E+
Sbjct: 139 ENIHGEVYSLAIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESSLFAEKLVAF 198
Query: 733 XXXXXXXXXXXXXXXXWLKKRGLMPGLTFXNELI 834
L+K+ ++PGL +LI
Sbjct: 199 SSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLI 232
>UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase small
chain; n=14; Bacteria|Rep: Ribonucleotide-diphosphate
reductase small chain - Streptomyces coelicolor
Length = 343
Score = 116 bits (278), Expect = 1e-24
Identities = 53/133 (39%), Positives = 81/133 (60%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNE 477
P++YPD ++ Y+ A + W VEEVDL D++D L E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 478 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 657
NLV + + EAR + Q+ E VH + Y L+DTY+ DP++R F AVE +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 658 KKKADWALQWIAS 696
++KA++ +W+ S
Sbjct: 145 REKAEFCFRWMDS 157
>UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;
n=9; Plasmodium|Rep: Ribonucleotide reductase small
subunit - Plasmodium falciparum
Length = 324
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/140 (33%), Positives = 78/140 (55%)
Frame = +1
Query: 256 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 435
+ +L+EN R+V+FPI+Y W YK+ E+ FWT E+ + KD E + + +K
Sbjct: 19 DEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENI--DKNMLVKD 76
Query: 436 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 615
+ + ++ +++ +Q+ E R FYGFQ+ MEN+H E+Y+ + +TYI D K+
Sbjct: 77 LHVY--EEQALITSKMLDI----IQIPEGRAFYGFQMCMENIHDEVYACIFETYIPDSKQ 130
Query: 616 RDFLFNAVETLPCVKKKADW 675
+ + N V L V KK W
Sbjct: 131 KRVIINKVIELDSVLKKQKW 150
>UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0257500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 352
Score = 90.2 bits (214), Expect = 6e-17
Identities = 58/196 (29%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
Frame = -2
Query: 837 GNKFIXECKSRHKAPLFEPEDGSKTA*EKDSXYSCKGNNPFTKCCSLACNPL*SPICFLL 658
G++ + E ++RH+ PL EPEDG++ A E+D + +G+ + + A +P P+
Sbjct: 111 GDELVGEGEARHEPPLLEPEDGAEGAREEDPLDAGEGDEALGEALA-AVDPAHGPVGLAA 169
Query: 657 YTGKSLNRIKQKISLLRISDVGIYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQV 478
+ ++ +Q + L ++DVG+ +Q +H R+++ G LE++E + L DL+ + +V
Sbjct: 170 HGRDGVDGAEQPVLLGAVADVGLEQQRVHLRVDVLDGDLESVEGARLGDLHVGHEPGGEV 229
Query: 477 FIYNAI*SRKESKDMLDEMSLT-IF*GFPV**ILGQIDFLDGPKRSFSFLVHLPYIGVLN 301
++A+ +E + + DE++L G PV + G++ L P+R LV LP + V +
Sbjct: 230 LEHDAVGGGEEGEHVGDEVALVGGQRGVPVARVGGEVHLLRRPERRHRLLVELPDLRVPD 289
Query: 300 REDDKAPRVLPQQRFL 253
RE ++ L QQR L
Sbjct: 290 REHRESLGRLRQQRLL 305
>UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n=1;
unknown|Rep: UPI00015BCE4B UniRef100 entry - unknown
Length = 319
Score = 85.4 bits (202), Expect = 2e-15
Identities = 42/129 (32%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSD-WETLKDSERHFIKHVLAFFAASDGIVNE 477
+ YP+I +Y KA+ ++W EE DL+ D + +E L D ERH++ H + FF++++G V +
Sbjct: 28 VVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGWVGQ 87
Query: 478 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 657
N++E S+ ++ TE R F G+Q+ E H + + ++D P E ++ E + +
Sbjct: 88 NILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHE---VYAMHENVKEI 143
Query: 658 KKKADWALQ 684
K+KAD+ ++
Sbjct: 144 KRKADFEVK 152
>UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;
n=1; Arabidopsis thaliana|Rep: Ribonucleotide reductase
small subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 83
Score = 84.6 bits (200), Expect = 3e-15
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +1
Query: 253 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSE 417
+EPLL +RF +FPI+Y IW+MYKKAEASFWT EEVDLS D+ WE L DSE
Sbjct: 7 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61
>UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep:
ORF20 - Ostreid herpesvirus 1
Length = 579
Score = 83.4 bits (197), Expect = 6e-15
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +1
Query: 145 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 324
R T +P + +L T D LTE D D K+ + + + ++ P Y +
Sbjct: 27 RKATLTPEQFEILNTSYDELTEFDDHPLYGGATDHHKDIVGKYD--HALLKPAVYQQLRD 84
Query: 325 MYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 504
K E+S W E+D D+ WE + ++ER ++ VLAFFA D +V + + F+ E
Sbjct: 85 FATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDR-IAIFADE 143
Query: 505 VQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVE--TLPCVKKKADWA 678
+ E + F +Q E VH +Y+ +D ++D L NA + +KKK DW
Sbjct: 144 FPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAPIKKKVDWL 203
Query: 679 LQWIASKTATFGE 717
+ I+ + + GE
Sbjct: 204 GKIISVENDSRGE 216
>UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase beta
subunit, putative; n=1; Babesia bovis|Rep:
Ribonucleoside-diphosphate reductase beta subunit,
putative - Babesia bovis
Length = 329
Score = 83.0 bits (196), Expect = 8e-15
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 244 DPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERH 423
+ E LL+EN R+V+FPI Y +W MYK+ E SFW E+ + + + +L R
Sbjct: 17 EQHNETLLKENANRWVMFPIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELRQ 76
Query: 424 FIKHVLAF---FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLL 585
+ ++++ S+ + + Q+ EAR FYGFQ++ EN+HSE++ ++
Sbjct: 77 LVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIM 133
>UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;
n=2; Cryptosporidium|Rep: Ribonucleotide reductase small
subunit - Cryptosporidium hominis
Length = 369
Score = 76.6 bits (180), Expect = 7e-13
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Frame = +1
Query: 235 EEFDPQK-EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKD 411
E + QK E +L +NP R+V+FPI+Y +W +YKK E SFWT E + +D + + +
Sbjct: 7 ELLEQQKNESILLDNPFRWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDE 66
Query: 412 SERHFIKHVLAFFAASDGIVNEN--LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLL 585
+I+ V A D + L +VQV EAR ++ F + MEN++ E++
Sbjct: 67 RLLDYIEMVFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENIYKELFMNY 126
Query: 586 IDTYIRDPKERDFLFNAVE 642
++ +R KE++ + VE
Sbjct: 127 VE-MLRKNKEKNEKTDEVE 144
>UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
z034R - Chlorella virus ATCV-1
Length = 410
Score = 75.4 bits (177), Expect = 2e-12
Identities = 50/181 (27%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
Frame = -2
Query: 834 NKFIXECKSRHKAPLFEPEDGSKTA*EKDSXYSCKGNNPFTKCCSLACNPL*SPICFLLY 655
++ + + ++ H+ P+ +PE+G++ E+ + ++ G+ + ++A P C L +
Sbjct: 130 DELVGQTQTGHEPPVAQPENGAERPGEQKTLHAHPGDEALCEG-AVARKVFRGPRCLLSH 188
Query: 654 TGKSLNRIKQKISLLRISDVGIYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQVF 475
L+ +++ ++L + + I +QG+ ++ L ++E +C +FL K + QV
Sbjct: 189 GRDRLDSLEELVTLGLVLNKSIKEQGVLLAVDALIVPLVSVEHTCRGVRDFLGKVVVQVL 248
Query: 474 IYNAI*SRKESKDMLDEMSLTIF*GF-PV**ILGQIDFLDGPKRSFSFLVHLPYIGVLNR 298
++AI + KE++D+LDE++L I F PV IL ++D L GP+ LVHL +GV +
Sbjct: 249 HHHAIAACKEAEDVLDEVALIIVQFFTPVYHILVELDLLHGPESGNGLLVHLENVGVPDG 308
Query: 297 E 295
E
Sbjct: 309 E 309
>UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Beggiatoa sp. PS|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Beggiatoa sp. PS
Length = 374
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDGIV 471
P++Y + + + A +FW E+ + +D W T L ++E K +++ ASD +V
Sbjct: 57 PVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLV 116
Query: 472 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLP 651
+NL + + E R ++ QI E+ H E Y +++++ D K + +FN + +P
Sbjct: 117 PDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESFGLDEKGQGQIFNLYQEVP 176
Query: 652 CVKKKADWAL 681
+ +K +W L
Sbjct: 177 ALTEKLNWNL 186
>UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2;
Theileria|Rep: Ribonucleoside reductase, putative -
Theileria annulata
Length = 332
Score = 72.9 bits (171), Expect = 9e-12
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +1
Query: 256 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 435
E LL+EN R+V+FPI++ W +YK+ E +FW E+ + D+ L + + +
Sbjct: 18 EILLKENHNRWVMFPIEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPIFNTLLN 77
Query: 436 VLAFFAASDGIV---NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 597
+L+F D + ++ EVQ+ EAR FYGFQ+ EN+H+E S + +
Sbjct: 78 LLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQLF 134
>UniRef50_Q8VB15 Cluster: Wsv190; n=1; Shrimp white spot syndrome
virus|Rep: Wsv190 - White spot syndrome virus (WSSV)
Length = 85
Score = 70.1 bits (164), Expect = 6e-11
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = -3
Query: 833 ISSLXNVSPGIRPRFLSQKMEAKLPEKKIPXTAAKATILSPNVAVLLAIHCRAQSAFFFT 654
++SL V PG P FL QKM+A P KKIP TAAKATI S ++LL I A +FF
Sbjct: 1 MNSLEEVRPGKIPLFLIQKMDANAPLKKIPSTAAKATISSAK-SLLLCIQLIAHCSFFLM 59
Query: 653 QGRVSTALNRKSLSFGSLM*VSIS 582
G+ ALN+ +LSF S +SIS
Sbjct: 60 AGKCCAALNKIALSFSSGTSLSIS 83
>UniRef50_P20560 Cluster: Uncharacterized 8.3 kDa protein; n=3;
Orthopoxvirus|Rep: Uncharacterized 8.3 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 78
Score = 68.1 bits (159), Expect = 3e-10
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 833 ISSLXNVSPGIRPRFLSQKMEAKLPEKKIPXTAAKATILSP 711
ISSL NVSPGIRPRFLSQ MEA PEKKIP TAAKA LSP
Sbjct: 38 ISSLENVSPGIRPRFLSQNMEANDPEKKIPSTAAKAISLSP 78
>UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4;
Orthopoxvirus|Rep: Uncharacterized 11.6 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 96
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = -2
Query: 687 PL*SPICFLLYTGKSLNRIKQKISLLRISDVGIYKQGIHFRMNIFHGYLEAIETSCLSDL 508
PL SPI L YT IK+ + + I ++ I ++ IHFRMN+F+G+L+++ETS L +L
Sbjct: 3 PLLSPIGLLFYTRHCFYGIKEIVFFITIFNISIDQKTIHFRMNVFNGHLKSVETSSLGNL 62
Query: 507 NFL*KSLNQVFIYNAI*SRKESKDM 433
F KS Q+FI+ ++ K+ + M
Sbjct: 63 YFCTKSFRQIFIHYSVTGCKKRQYM 87
>UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n=1;
Opitutaceae bacterium TAV2|Rep:
Ribonucleoside-diphosphate reductase - Opitutaceae
bacterium TAV2
Length = 362
Score = 66.9 bits (156), Expect = 6e-10
Identities = 33/136 (24%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Frame = +1
Query: 286 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE---TLKDSERHFIKHVLAFFAA 456
F + P++Y + +Y+ +A+ W E++ + KD+ W + D ER I+ + +F+A
Sbjct: 37 FNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFSA 96
Query: 457 SDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNA 636
++GIV +N+ + V E + G EN+H++ +I + +P E + +F
Sbjct: 97 AEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPHECEAMF-- 154
Query: 637 VETLPCVKKKADWALQ 684
E +P + +K ++ ++
Sbjct: 155 -EDIPTIVRKNEFVVK 169
>UniRef50_A7IV34 Cluster: Putative uncharacterized protein m654R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
m654R - Chlorella virus MT325
Length = 188
Score = 66.5 bits (155), Expect = 8e-10
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = -3
Query: 833 ISSLXNVSPGIRPRFLSQKMEAKLPEKKIPXTAAKATILSPNVAVLLAIHCRAQSAFFFT 654
++SL PGI PRFLSQK+ K PE P T AT S N C A +AFF T
Sbjct: 92 MNSLDRPKPGITPRFLSQKIAQKEPENSRPSTHTHATRRSANDLSCDRNFC-AHAAFFPT 150
Query: 653 QGRVSTALNRKSLSFGSLM*VSISREYISE*TFSMAIW 540
G VS A R+ S S M S REYISE S+ IW
Sbjct: 151 AGIVSIASKREFRSASSSMSASSRREYISEWMDSLNIW 188
>UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=22; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 339
Score = 65.3 bits (152), Expect = 2e-09
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 262 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHV 438
L+ NP V P +YP + + + W EEV L+ D+ DW TL ++ERH + +
Sbjct: 18 LMTANP---VYKPFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWHRTLTEAERHLVTQI 74
Query: 439 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 594
FF SD VN ++ +SQ + TE +E +H YS L+DT
Sbjct: 75 FRFFTQSDVEVNSAYMKYYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDT 126
>UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase beta
subunit; n=11; Francisella tularensis|Rep: Biofunctional
glutaredoxin 3 protein/Ribonucleoside-diphosphate
reductase beta subunit - Francisella tularensis subsp.
tularensis (strain WY96-3418)
Length = 410
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDS--ERHFIKHVLAFFAASDGIV 471
P YP + K E + W +E+DLS+D++DW+ K + E+ +I ++L F SD V
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAV 161
Query: 472 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 594
+N ++F + E R G A E +H Y+LL DT
Sbjct: 162 GQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDT 202
>UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=13; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Treponema pallidum
Length = 351
Score = 62.9 bits (146), Expect = 1e-08
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
++YP + + Y++A +FW EE+++S D+ D+ L E+ +L+F D I N
Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTAN 100
Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKER-DFLF 630
L Q + E Q E VHS+ YS ++DT I P+ER D L+
Sbjct: 101 L-PNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDT-ICSPEERNDILY 149
>UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n=1;
Halobacterium salinarum|Rep: Ribonucleoside reductase
small chain - Halobacterium salinarium (Halobacterium
halobium)
Length = 331
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +1
Query: 292 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE--TLKDSERHFIKHVLAFFAASDG 465
I PI Y + Y++ A+ WT EEV + D+S W+ L D+ER ++ L FF+ ++
Sbjct: 15 ILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAES 74
Query: 466 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVET 645
+ N+V + V E R + Q E VH++ + D+ DP + ++ +
Sbjct: 75 LTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDP---EHMYGMYDR 131
Query: 646 LPCVKKKADWAL 681
+P + +K ++ +
Sbjct: 132 IPSIAEKDEFVV 143
>UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;
n=6; Proteobacteria|Rep: Ribonucleotide reductase, beta
subunit - Hahella chejuensis (strain KCTC 2396)
Length = 405
Score = 60.9 bits (141), Expect = 4e-08
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Frame = +1
Query: 91 MAPTVDKXXLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 270
+A + S ++ ++ V T SP D+ + + + E PQK +
Sbjct: 19 LAVAIPAVSTSSAVSPQSPVST-SPAAAPAAGGAPDSAAKPAPVAEPVPEEVPQKLDPVN 77
Query: 271 ENPRRFV--------IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERH 423
+ +R V + P +YP W+ + A + WT ++++S+D+ D+ L E+H
Sbjct: 78 PDDKRVVNGMTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKH 137
Query: 424 FIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIR 603
++VLA+ SD + N+ +++ E + + Q+ E++H+ Y I+T
Sbjct: 138 VYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGL 197
Query: 604 DPKERDFLFNAVETLPCVKKK 666
D E ++N P + +K
Sbjct: 198 DQSE---IYNRYRVTPAIYRK 215
>UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=29; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta subunit -
Bradyrhizobium japonicum
Length = 360
Score = 59.7 bits (138), Expect = 9e-08
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Frame = +1
Query: 304 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDGIVNE 477
+Y ++ +K+ + + W EEV L DL+DW + + DSER + + FF SD V +
Sbjct: 36 RYAWAYEFWKRQQQTHWMGEEVPLGADLNDWASGRVTDSERALLTQIFRFFTQSDIEVGD 95
Query: 478 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 657
N +R+ Q + ME VH + Y+LL+ T + PK F A +
Sbjct: 96 NYFKRYIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKT-LGMPKTE---FEAFRGYAQM 151
Query: 658 KKKADW 675
+ KAD+
Sbjct: 152 RAKADY 157
>UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=6; Clostridium|Rep:
Ribonucleoside-diphosphate reductase, beta subunit -
Clostridium novyi (strain NT)
Length = 342
Score = 59.7 bits (138), Expect = 9e-08
Identities = 30/111 (27%), Positives = 58/111 (52%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
I+Y ++Y+ +FW EE+ L++D+ + L D ER+ +++F D + +EN
Sbjct: 32 IKYNWANELYRTMLNNFWIPEEISLNEDVKQFPYLTDGERNAFDKIISFLNFLDSVQSEN 91
Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFN 633
L S+ + E Q E +H++ YS ++DT + +P RD +++
Sbjct: 92 L-PNISRYITAPEVSSLLNVQTFQEEIHAQSYSYILDT-VTNPITRDKIYD 140
>UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent virus
6|Rep: 376L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 360
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVN 474
P YP+ + + K E S W EV + D++DW+ L D++R F+ ++ FF D V
Sbjct: 12 PFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVA 71
Query: 475 ENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 594
++ ++ E G E VH + YS L++T
Sbjct: 72 SAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLET 111
>UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=2; Deinococcus|Rep: Ribonucleoside-diphosphate
reductase, beta chain - Deinococcus radiodurans
Length = 354
Score = 58.4 bits (135), Expect = 2e-07
Identities = 36/113 (31%), Positives = 54/113 (47%)
Frame = +1
Query: 328 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 507
Y K + W EE+ L+ D W+TL D ER H A A D + E + R V
Sbjct: 44 YAKYTSQLWFPEEIPLTNDALAWKTLSDEERWTYIHASAGLNALDTLQGEVGMPRLRDLV 103
Query: 508 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKK 666
+ FQ ME++H+ YSL+ T++ +ER+ +F V T P ++ K
Sbjct: 104 DGHIRKATLQFQGMMEDIHARSYSLMNKTFLTASEERE-VFEWVRTQPQLQHK 155
>UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=6; Actinobacteria (class)|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Propionibacterium acnes
Length = 328
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/135 (22%), Positives = 66/135 (48%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNE 477
P+ Y + +Y +A A+ W E+ L +DL+D+ + E H + H++++F ++ +VN+
Sbjct: 15 PVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNK 74
Query: 478 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 657
L V E + Q+ E H + +++T+ P +RD + + +P +
Sbjct: 75 ALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF---PIDRDEAYRSHIHVPSM 131
Query: 658 KKKADWALQWIASKT 702
+K + + +I T
Sbjct: 132 ARKEAFEVAFIKRMT 146
>UniRef50_Q8TGJ8 Cluster: Uncharacterized protein YJL026C-A; n=2;
Saccharomycetaceae|Rep: Uncharacterized protein
YJL026C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 73
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = -3
Query: 836 EISSLXNVSPGIRPRFLSQKMEAKLPEKKIPXTAAKATILSPNVA 702
+I+SL V PGI P F +QKMEAK PEKK P AKAT LSPN A
Sbjct: 26 QINSLEKVKPGIIPLFFNQKMEAKEPEKKTPSMEAKATSLSPNKA 70
>UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=117; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 346
Score = 56.8 bits (131), Expect = 6e-07
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Frame = +1
Query: 292 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDG 465
+ PI+Y W+ Y A+ W EV +++D+ W++ L + ER I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 466 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVET 645
+V N+V + + EAR + Q E VH+ + + ++ D E +FNA
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147
Query: 646 LPCVKKKADWAL 681
++ K D+ +
Sbjct: 148 RASIRAKDDFQM 159
>UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=17; Bacteria|Rep: Ribonucleoside-diphosphate
reductase, beta subunit - Bacillus anthracis
Length = 322
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/114 (30%), Positives = 56/114 (49%)
Frame = +1
Query: 328 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 507
+K+ A FWT EE+ +S D + W L E+ K VL D + +
Sbjct: 18 WKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHL 77
Query: 508 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 669
+ +A+ F AME VH++ YS + T + +E D +F+ V+T P ++KKA
Sbjct: 78 ENLQAKSVLAFMGAMEEVHAKSYSHIFTT-LATEEEIDEIFDWVDTHPLLEKKA 130
>UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 65
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +1
Query: 223 DKNFEEFDPQKEP---LLRENPRRFVIFPIQYPDIWQMYKKAEASFWT 357
+K F +F KE +L + RF + PI YP++W YKKAEASFWT
Sbjct: 17 EKEFSDFQKTKESNEKILNKESNRFTLHPIIYPEVWNFYKKAEASFWT 64
>UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1
subunit beta; n=171; root|Rep:
Ribonucleoside-diphosphate reductase 1 subunit beta -
Salmonella typhimurium
Length = 376
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = +1
Query: 244 DPQKEPLLRENPRRFVIFPIQYPDIWQ-MYKKAEASFWTVEEVDLSKDLSDWETLKDSER 420
D KEP+ P + Q DI++ + +K + FW EEVD+S+D D++ L + E+
Sbjct: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71
Query: 421 HFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 600
H L + D I + + + E + E +HS Y+ +I +
Sbjct: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131
Query: 601 RDPKERDFLFNAVETLPCVKKKAD 672
DP +F+ + T ++K+A+
Sbjct: 132 NDPA---VVFDDIVTNEQIQKRAE 152
>UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase
subunit beta (EC 1.17.4.1) (Ribonucleotide reductase
small subunit) [Contains: Aae nrdB intein (Aae RIR2
intein)]; n=1; Aquifex aeolicus|Rep:
Ribonucleoside-diphosphate reductase subunit beta (EC
1.17.4.1) (Ribonucleotide reductase small subunit)
[Contains: Aae nrdB intein (Aae RIR2 intein)] - Aquifex
aeolicus
Length = 696
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Frame = +1
Query: 244 DPQKEPLLRENPRR-FVIFPIQYPDIWQMYK-KAEASFWTVEEVDLSKDLSDWET-LKDS 414
+ K +++ NP F + I+Y + +YK +FW EE+ + +D +ET L D
Sbjct: 22 EASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDY 81
Query: 415 ERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 594
E+ + VL+F A D ++++ F + + E Q E+VH+ Y ++++
Sbjct: 82 EKRAYELVLSFLIALDSF-QVDMLKEFGRMITAPEVEMAITAQEFQESVHAYSYQFILES 140
Query: 595 YIRDPKERDFLFN 633
+ DP + D ++N
Sbjct: 141 VV-DPVKADEIYN 152
>UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=6; Lactobacillales|Rep:
Ribonucleoside-diphosphate reductase, beta chain -
Lactobacillus plantarum
Length = 336
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/116 (23%), Positives = 55/116 (47%)
Frame = +1
Query: 328 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 507
++K FW + +S D++DW L D R + HV D + +++ ++ + V
Sbjct: 34 WEKLTEQFWLDTRIPVSNDMADWRELDDDHRWVVGHVFGGLTLLDTLQSQDGLQALRRNV 93
Query: 508 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADW 675
+ ME+VH++ YS + +T + P E + +F+ ++ ++ KA W
Sbjct: 94 LTSHETAVLNNIQFMESVHAKSYSTIFET-LNTPDEINEIFDWSDSEEFLQAKAQW 148
>UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep:
Slr0591 protein - Synechocystis sp. (strain PCC 6803)
Length = 355
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/117 (23%), Positives = 59/117 (50%)
Frame = +1
Query: 325 MYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 504
+Y++ +FW + +D+++D++D+ L + ER+ +L++ D + N +
Sbjct: 53 LYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSYLTFLDSVQTCN-IPHLKSS 111
Query: 505 VQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADW 675
V E QI+ E +H++ Y +I+T I K RD ++ T +K++ ++
Sbjct: 112 VTAPEISLCMAEQISQEGMHNQSYQYMIETIIPTEK-RDKVYEFWRTDRVLKERCEY 167
>UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
b640L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 139
Score = 52.8 bits (121), Expect = 1e-05
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = -2
Query: 564 MNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDMLDEMSLTIF*GF-PV* 388
MN F L IE SCL +F K ++F ++ + + KE ++M DE+S + PV
Sbjct: 1 MNGFVECLICIELSCLWCHHFDTKVCLKIFHHDTVGACKEPQNMFDEVSFIVVQFLTPVC 60
Query: 387 *ILGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPR-VLPQQRFLLWVELFEIFIEVHF 211
+ + +FL GPK LVH+P I +LN + + R V+ Q RFL ++ I+ +
Sbjct: 61 NVCVKRNFLGGPKGCHCLLVHVPQIMILNGKRRELTRSVVGQNRFLCCHSIYFIYNSTYK 120
Query: 210 LSQIVIFR 187
+++ I R
Sbjct: 121 YTRLSICR 128
>UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage
phiKZ|Rep: PHIKZ305 - Pseudomonas phage phiKZ
Length = 387
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 435
E +L ++P YP +W++YK+ + W E D S L ++ET S +
Sbjct: 23 EIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCLVEFETCDKSTYDMMIK 82
Query: 436 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMEN--VHSEMYSLLIDTYIRDP 609
LA+ +D + + ++V S +T++R + G+ +N VH+ YS ++ +DP
Sbjct: 83 TLAWQWEADSVASRSIVNILSP--VMTDSRVWAGYVRINDNEDVHALTYSEIVRNSFKDP 140
Query: 610 K 612
K
Sbjct: 141 K 141
>UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=10; root|Rep: Ribonucleotide-diphosphate
reductase beta subunit - Pseudoalteromonas tunicata D2
Length = 376
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/123 (26%), Positives = 56/123 (45%)
Frame = +1
Query: 304 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 483
++P ++ +K + FW EEVD+SKD D+E L D E+H L + D I +
Sbjct: 33 KHPIFEKLIEKQLSFFWRPEEVDVSKDRVDFENLPDHEKHIFLSNLKYQTLLDSIQGRSP 92
Query: 484 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKK 663
V + E + E +HS Y+ +I + P + +F+ + +K+
Sbjct: 93 NVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNVTKQP---ELIFDDIVDNDKIKE 149
Query: 664 KAD 672
+AD
Sbjct: 150 RAD 152
>UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Psychroflexus torquis ATCC 700755|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Psychroflexus torquis ATCC 700755
Length = 270
Score = 49.6 bits (113), Expect = 1e-04
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
++YP I ++ +K FW EEVD+SKD D+ L + E+H L D +
Sbjct: 30 VKYPQIEKITEKQLGFFWRPEEVDVSKDKKDFHELTEHEQHIFTSNLKRQILLDSVQGRA 89
Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE-RDFLFNAVETLPCV 657
F V + E + E +HS Y+ +I DP D + + E + C
Sbjct: 90 PNLAFLPHVSLPEVENWIETWSFFETIHSRSYTHIIRNIYPDPSAVFDKMLDIKEIIECG 149
Query: 658 KKKADW 675
A++
Sbjct: 150 NDIAEY 155
>UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep:
Lmo2154 protein - Listeria monocytogenes
Length = 349
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/122 (20%), Positives = 54/122 (44%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
I YP ++ YK+ ++W +EVD+ D + L + E++ ++ A D
Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDS-PQTR 97
Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVK 660
+ ++ + E +H+E YS ++ + I + +E++ +F T P +
Sbjct: 98 FIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLAS-ITNLQEQNRVFELARTHPTII 156
Query: 661 KK 666
K+
Sbjct: 157 KR 158
>UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2;
Lymphocystivirus|Rep: Ribonucleotide reductase -
Lymphocystis disease virus - isolate China
Length = 374
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE--TLKDSERHFIKHVLAFFAASDGIV 471
P YP ++ E WT +E+ L+ D++DW+ L D E+ FI +L F D V
Sbjct: 73 PFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSV 132
Query: 472 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 594
+ F + E R E H + Y+LL DT
Sbjct: 133 GQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDT 173
>UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;
n=21; root|Rep: Ribonucleotide reductase minor subunit -
Staphylococcus aureus
Length = 323
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 313 DIWQMYKKAEAS-FWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 489
D+ M+ + S W E +SKD++ W+TL ++E+ K LA D ++ +
Sbjct: 11 DMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMP 70
Query: 490 RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 669
+ Y F ME +H++ YS + T + + L V P +K K+
Sbjct: 71 LVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDEWVLEEPHLKYKS 130
Query: 670 D 672
D
Sbjct: 131 D 131
>UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3;
Myoviridae|Rep: Ribonucleotide reductase B subunit -
Cyanophage phage S-PM2
Length = 394
Score = 46.4 bits (105), Expect = 9e-04
Identities = 26/104 (25%), Positives = 43/104 (41%)
Frame = +1
Query: 304 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 483
+YP ++ ++ FW EEV L KD +D++ L+ ++H L + D +
Sbjct: 49 KYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQQLRPEQKHIFTSNLKYQIMLDSVQGRGP 108
Query: 484 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 615
F + E ME VHS Y+ +I DP +
Sbjct: 109 GMAFMPYCSLPELESAMNIWQTMEMVHSRSYTHIIKNIYPDPSD 152
>UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=19; Herpesviridae|Rep:
Ribonucleoside-diphosphate reductase small chain -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 305
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/173 (18%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Frame = +1
Query: 322 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQ 501
++ K+ + W +V L D+ + L + + F K + F ++ +VN N+ + SQ
Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLLSQ 77
Query: 502 EVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNA-VETLPCVKKKADWA 678
+ +Y Q+AMEN+H ++Y+ +++ ++ + + + +++K W
Sbjct: 78 -FDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLRW- 135
Query: 679 LQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLKKRGLMPGLTFXNELIS 837
L ++ + E+ + RG+M G+ N+ I+
Sbjct: 136 LNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIA 188
>UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit, putative; n=17; Actinomycetales|Rep:
Ribonucleoside-diphosphate reductase, beta subunit,
putative - Mycobacterium tuberculosis
Length = 314
Score = 45.6 bits (103), Expect = 0.002
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 322 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFS- 498
+++ A FW ++D ++D +DWE L D ER + + F A + V E++ S
Sbjct: 22 KLFAGGNAKFWDPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSA 81
Query: 499 QEVQVTEARCFYGFQIAMENV-HSEMYSLLID 591
+ A Y Q A E H++++ + +D
Sbjct: 82 MRAEGRLADEMYLTQFAFEEAKHTQVFRMWLD 113
>UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=4; root|Rep: Ribonucleoside-diphosphate
reductase beta subunit - Oceanobacillus iheyensis
Length = 347
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
I YP ++MYK+ ++W +EV++S D+ + TL E+ ++ + D
Sbjct: 37 IAYPHWYKMYKRLVGNYWQADEVNMSSDVKQFSTLSKEEQDAYLKIIGLLSTLDAPQTRT 96
Query: 481 --LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 600
L+ ++ + V Q E VH+E YS ++ + +
Sbjct: 97 ALLISLYATDPSVQSIMAVIAQQ---EAVHNESYSYVLSSVV 135
>UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z038R - Chlorella virus ATCV-1
Length = 104
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 467 MPSEAAKKARTCLMKCLSLSFKVXXXXXXX-XXXXXXTVQNEASAFLYICHISGY*IG 297
MPS AKK R CLMK S SF TVQ A+AFLYI +SGY +G
Sbjct: 1 MPSLPAKKPRMCLMKWRSSSFSFSRQSTTSWLSWTSSTVQKVATAFLYIWKMSGYRMG 58
>UniRef50_Q4J6V7 Cluster: Ribonucleoside-diphosphate reductase; n=3;
Sulfolobus|Rep: Ribonucleoside-diphosphate reductase -
Sulfolobus acidocaldarius
Length = 314
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +1
Query: 322 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQ 501
++Y+ + FW ++D SKD DW+ L E++++ ++++ F A + V ++ S
Sbjct: 33 KLYQIGKRLFWDPAKIDFSKDKEDWKKLSKDEKNYLLNIVSLFMAGEEAVAVDITPLIS- 91
Query: 502 EVQVTEAR---CFYGFQIAMENV-HSEMYSLLIDT 594
+ E R Y Q A E H+E + D+
Sbjct: 92 -TMINEGRVEDVIYLEQFAFEEAKHAEAFRRFCDS 125
>UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=5; Bacillaceae|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Bacillus halodurans
Length = 345
Score = 42.7 bits (96), Expect = 0.011
Identities = 21/100 (21%), Positives = 49/100 (49%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
+++ + +YK A+FWT E+++S D + TL ++E+ K ++ A D + +
Sbjct: 35 VRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDY 94
Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 600
+ R ++ + + E VH++ YS ++ + +
Sbjct: 95 SM-RAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLV 133
>UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1;
Pedobacter sp. BAL39|Rep: Ribonucleotide-diphosphate -
Pedobacter sp. BAL39
Length = 327
Score = 41.5 bits (93), Expect = 0.025
Identities = 25/107 (23%), Positives = 45/107 (42%)
Frame = +1
Query: 349 FWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARC 528
FW E SKD+ W++L + K L D + + + + + + +
Sbjct: 28 FWVDTEYIPSKDIDSWKSLSPEIQQVYKRALGGLTLLDTLQSHTGMPKLLDHIDGLQNKA 87
Query: 529 FYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 669
F ME +H++ YS + T + E + LF+ VE ++ KA
Sbjct: 88 VLSFMCMMEAIHAKSYSTIFTT-VNSTPEINELFDWVENNKLLQFKA 133
>UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate
reductase beta chain; n=2; Enterobacteria phage Felix
01|Rep: Putative ribonucleoside diphosphate reductase
beta chain - Enterobacteria phage Felix 01
Length = 377
Score = 40.7 bits (91), Expect = 0.044
Identities = 24/102 (23%), Positives = 51/102 (50%)
Frame = +1
Query: 307 YPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLV 486
YP I+++YK+ +A W+ +E + D+E++ S + +L + +D V ++L
Sbjct: 43 YPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVMLEILKWQWEADTQVAKSLA 102
Query: 487 ERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPK 612
F+ + Q +EN+H+ YS ++ I++P+
Sbjct: 103 FAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPE 144
>UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain;
n=1; Sulfolobus acidocaldarius|Rep: Ribonucleotide
reductase, small chain - Sulfolobus acidocaldarius
Length = 330
Score = 40.7 bits (91), Expect = 0.044
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 322 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLV 486
++++ E WT E+D SKD DW+ LK S+R K + ++F A + V +++
Sbjct: 35 RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEECVARDIL 89
>UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage
0305phi8-36|Rep: Nrd beta subunit - Bacillus phage
0305phi8-36
Length = 352
Score = 39.9 bits (89), Expect = 0.077
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +1
Query: 313 DIW-QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 489
+IW + + EA+FW E+ + +D W++L E+ V A D + + ++E
Sbjct: 45 EIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDSLQVKAILE 104
Query: 490 --RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKK 663
RF+ + F Q E H+ YS + + +R P + + FN P + K
Sbjct: 105 VIRFTTNSALANISAFIAQQ---EATHTTSYSYITSSLVRLPVQNQY-FNETMKHPVLAK 160
Query: 664 K 666
+
Sbjct: 161 R 161
>UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=14; root|Rep: Ribonucleoside-diphosphate
reductase subunit beta - Bacillus subtilis
Length = 329
Score = 39.5 bits (88), Expect = 0.10
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +1
Query: 313 DIWQM-YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 489
D QM Y + FW EE+ L+ DL W+ L +E+ VLA D +
Sbjct: 16 DFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMP 75
Query: 490 RFSQEVQVTEARCFYGFQIAMEN-VHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKK 666
++ V + + F MEN VH++ YS + T + + + +F V+ ++KK
Sbjct: 76 IVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMT-LAPTETINEVFEWVKQNKYLQKK 134
Query: 667 A 669
A
Sbjct: 135 A 135
>UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,
beta subunit; n=1; Staphylococcus epidermidis RP62A|Rep:
Ribonucleoside-diphosphate reductase 2, beta subunit -
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Length = 340
Score = 39.1 bits (87), Expect = 0.14
Identities = 28/113 (24%), Positives = 43/113 (38%)
Frame = +1
Query: 328 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 507
+K+ WT EE SKDLS W+TL E+ L+ D + +
Sbjct: 23 WKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGLDTTQGTEGMPLLAFHY 82
Query: 508 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKK 666
R + F MEN+H + YS + + + +L V + KK
Sbjct: 83 PEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWVPANKYLNKK 135
>UniRef50_P55983 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=27; Epsilonproteobacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Helicobacter pylori (Campylobacter pylori)
Length = 341
Score = 39.1 bits (87), Expect = 0.14
Identities = 25/110 (22%), Positives = 48/110 (43%)
Frame = +1
Query: 286 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDG 465
F + I+Y ++K A+ W EEV ++ D D+ L E+ LA D
Sbjct: 31 FDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQLIFMDS 90
Query: 466 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 615
+ NL++ + + E Q E +HS Y++++++ + +E
Sbjct: 91 LQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEE 140
>UniRef50_Q6QGJ3 Cluster: Putative aerobic ribonucleoside
diphosphate reductase, small subunit; n=1;
Enterobacteria phage T5|Rep: Putative aerobic
ribonucleoside diphosphate reductase, small subunit -
Bacteriophage T5
Length = 381
Score = 38.7 bits (86), Expect = 0.18
Identities = 24/105 (22%), Positives = 41/105 (39%)
Frame = +1
Query: 301 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 480
+ +P++ ++ A + FWT E+ L D W L + LA+ +D ++
Sbjct: 30 VAHPELERLALLARSQFWTETEISLEADKKQWPNLPREIQEITLLNLAWQTQTDSFISRA 89
Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 615
V E E++HS YS +I + DP E
Sbjct: 90 PEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVLTDPAE 134
>UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 369
Score = 38.3 bits (85), Expect = 0.24
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 292 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 471
I+P Y W Y+ +A++W+ E + +D+S + L + + H A A D V
Sbjct: 38 IWPPTYAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAV 97
Query: 472 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 588
+ + E + + T+ + Q A E +H +Y+ ++
Sbjct: 98 MQFIDENDLEWEECTQ--WMFKDQGARETIHKIVYNKML 134
>UniRef50_Q4J6S5 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus acidocaldarius|Rep: Putative uncharacterized
protein - Sulfolobus acidocaldarius
Length = 345
Score = 37.5 bits (83), Expect = 0.41
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 322 QMYKKAEASFWTVEEVD--LSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERF 495
+++ K+ FW+ + + +D DWET+ +SER +++ F+A + V+ L E
Sbjct: 33 RLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFSAGEEAVSRYLAELV 92
Query: 496 --SQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 594
E+ TE F E H++ + +D+
Sbjct: 93 IALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDS 127
>UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG9246-PA - Nasonia vitripennis
Length = 744
Score = 36.7 bits (81), Expect = 0.72
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 124 SGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPI 303
S E Q K P++ + K+ TE N ++ DP+ L+EN +R + F I
Sbjct: 73 SDAEDEELEQEKQPVEAAKTLKKSKKKTEHKKALMNLQDTDPEFFKYLKENDKRLLDFNI 132
Query: 304 --QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 399
++ + ++++ T++E+++ D SD+E
Sbjct: 133 DDDGDNMSEADEESKVHVPTIDELEIGSDESDYE 166
>UniRef50_A7R4N6 Cluster: Chromosome undetermined scaffold_747,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_747, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 82
Score = 36.7 bits (81), Expect = 0.72
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 787 KKRGLMPGLTFXNELIS 837
KKRGLMPGLTF NELIS
Sbjct: 18 KKRGLMPGLTFSNELIS 34
>UniRef50_A4L226 Cluster: Ribonucleotide reductase small subunit;
n=1; Gryllus bimaculatus nudivirus|Rep: Ribonucleotide
reductase small subunit - Gryllus bimaculatus nudivirus
Length = 371
Score = 35.9 bits (79), Expect = 1.3
Identities = 24/91 (26%), Positives = 40/91 (43%)
Frame = +1
Query: 319 WQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFS 498
+ + K A W+ EE+ LSKD + + + + +L A D IV +NL + S
Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130
Query: 499 QEVQVTEARCFYGFQIAMENVHSEMYSLLID 591
+ + Q +E HS+ YS +D
Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLD 161
>UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|Rep:
Protein STU1 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 1529
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 127 GINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR---ENPRRFV 291
GIN + ++Q MK++ N + M+ FE FD Q +P+L+ N + F+
Sbjct: 744 GINADAQIQNIETMKSTYSVDDNSSNRTNMEQTNKFESFDKQSDPILKFLSSNQKEFI 801
>UniRef50_A3I5A8 Cluster: Ribonucleotide-diphosphate; n=1; Bacillus
sp. B14905|Rep: Ribonucleotide-diphosphate - Bacillus
sp. B14905
Length = 322
Score = 35.5 bits (78), Expect = 1.7
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 352 WTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGI---VNENLVERFSQEVQVTEA 522
W EE+ +SKD+ W++ + + + K V A D + + N V ++ ++Q
Sbjct: 31 WFPEEIAVSKDIKQWKSFEHQDTY--KKVFAGLTLLDTVQTNIGMNRVAAYTDDLQEKAV 88
Query: 523 RCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKAD 672
+ A E +H++ YS + T + +E D LF V+ ++ KA+
Sbjct: 89 LTVFD---AFEAIHAKSYSYIFTTLCTN-EEIDELFEWVKKNEYLQYKAN 134
>UniRef50_UPI000155436B Cluster: hypothetical protein ORF027; n=1;
Pseudomonas phage PA11|Rep: hypothetical protein ORF027
- Pseudomonas phage PA11
Length = 322
Score = 34.7 bits (76), Expect = 2.9
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Frame = +1
Query: 295 FPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHVLAFFAASDGIV 471
+ YP+ Q K + FWT +E+++ KD+ D + ++E H + L F + +
Sbjct: 11 YTFDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVA 70
Query: 472 NEN-----LVERFSQEVQVTEARCFYGFQIAMENVHSEMY-----SLLIDT------YIR 603
+ +++ F + A F F++ NVH+ Y +L+++T Y+
Sbjct: 71 GRDYWLGRVLKTFPRPDIERMAATFGFFEL---NVHAPFYNKINEALMLNTDEFYLAYVN 127
Query: 604 DP--KER-DFLFNAVE 642
DP KER +F+ + VE
Sbjct: 128 DPILKERMEFVDSLVE 143
>UniRef50_A5FCJ5 Cluster: Ribonucleotide reductase; n=1;
Flavobacterium johnsoniae UW101|Rep: Ribonucleotide
reductase - Flavobacterium johnsoniae UW101
Length = 324
Score = 34.7 bits (76), Expect = 2.9
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Frame = +1
Query: 298 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVN 474
P +YP++ Q + ++W EVD + D D+ L +E+ +K+ L A + V
Sbjct: 12 PFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIEVAVK 71
Query: 475 E---NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVET 645
N+ E F + E E HSE YS L++ + + F +
Sbjct: 72 SFWGNIYEHFPK----PEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE-----FEKLLD 122
Query: 646 LPCVKKKADW 675
+P ++++ D+
Sbjct: 123 VPVIRRRVDY 132
>UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative Fe-S
oxidoreductase - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 478
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 172 NSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 276
NS+L + ++N ++D+DKN E+ QK+ LREN
Sbjct: 20 NSILLSPSENEYVDIDMDKNAYEYYKQKDFFLREN 54
>UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Putative outer protein N
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 398
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 121 HSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQ 252
H G GEN T M ++A KN+N +DK ++ DPQ
Sbjct: 286 HKG-GGENSTLTPLEMMRELIALKNENFISPSSIDKIVDQADPQ 328
>UniRef50_A3J9D7 Cluster: TRNA-dihydrouridine synthase A; n=1;
Marinobacter sp. ELB17|Rep: TRNA-dihydrouridine synthase
A - Marinobacter sp. ELB17
Length = 264
Score = 33.5 bits (73), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 340 EASFWTVEEVDLSKDLSDWETLKDSERHFIK 432
E S WT++++ S DL DW+ + D R IK
Sbjct: 70 EFSGWTLDQISTSSDLLDWQLVVDQNRIMIK 100
>UniRef50_Q01LS0 Cluster: OSIGBa0139J17.4 protein; n=12; Oryza
sativa|Rep: OSIGBa0139J17.4 protein - Oryza sativa
(Rice)
Length = 1515
Score = 33.5 bits (73), Expect = 6.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 657 KEESRLG-STVDCKQDCNIW*K-DCCLCSCXRNLFLRQFCFHLLAQKA 794
+++S +G T D +C +W + C C+C + L + C H+LA A
Sbjct: 680 RDKSGVGIGTTDITLECTLWPEYHACKCNCNKTYLLHRPCSHVLAASA 727
>UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium phage 11b|Rep: Putative uncharacterized
protein - Flavobacterium phage 11b
Length = 154
Score = 33.5 bits (73), Expect = 6.7
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +1
Query: 142 NRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIW 321
N++QTK +K A D T +++ KN E D EP+ +N F++ Y ++
Sbjct: 24 NKIQTKEVVKIDSTAKIVDKETIKIETKKNIENEDYYYEPI--DNKSEFIVDGKVYKNVH 81
Query: 322 QMYKKAEASFWTVEEVDLSKDLSDWETLKD 411
+KK + + + EV +D KD
Sbjct: 82 IKHKK-QKDYTNIAEVKTFDKKTDISVKKD 110
>UniRef50_Q95S88 Cluster: GM05661p; n=4; Sophophora|Rep: GM05661p -
Drosophila melanogaster (Fruit fly)
Length = 376
Score = 33.5 bits (73), Expect = 6.7
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +1
Query: 154 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 333
T+ P+ N +L+T + E+ L + + ++ +L + ++ FPI W+
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298
Query: 334 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 438
+ S E + L + L DW K RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329
>UniRef50_Q8YTL8 Cluster: Sensor protein; n=2; Nostocaceae|Rep:
Sensor protein - Anabaena sp. (strain PCC 7120)
Length = 920
Score = 33.1 bits (72), Expect = 8.9
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 471
+FP ++W+ KK++A WT EE++L+K++ + + V AF + V
Sbjct: 377 MFPRVSFNLWRDAKKSQAQEWTSEEIELAKEIGQHFASAIQQYELYQQVQAFNENLEKQV 436
Query: 472 NENLVE-RFSQEVQ 510
+ +E R + E Q
Sbjct: 437 QKRTLELRHTSEQQ 450
>UniRef50_A3XHF9 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit 1; n=9; cellular organisms|Rep:
Ribonucleoside-diphosphate reductase, beta subunit 1 -
Leeuwenhoekiella blandensis MED217
Length = 427
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 280 RRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVL 441
+R + P +YP++ + S+W E + + D+ D++T L + ER IK+ +
Sbjct: 109 KRINLKPYEYPELNEYVAAIRHSYWIHTEFNFTSDIQDFKTGLSEVERSAIKNTM 163
>UniRef50_A5B5F6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 172
Score = 33.1 bits (72), Expect = 8.9
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 662 RKQIGLYSGLQARLQHLVKGLLPLQLXKESFSQAVLLP 775
RKQ GLYSG ARLQ V LP+ L K+S A +LP
Sbjct: 90 RKQDGLYSGTDARLQRCVNDGLPM-LGKDS---ATILP 123
>UniRef50_O43272 Cluster: Proline oxidase, mitochondrial precursor;
n=33; Euteleostomi|Rep: Proline oxidase, mitochondrial
precursor - Homo sapiens (Human)
Length = 516
Score = 33.1 bits (72), Expect = 8.9
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 334 KAEASFW-TVEEVDLS--KDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 504
+AE W T E + +S DL DW +L DS KH++ A + + E L+ RF++E
Sbjct: 210 RAEIEDWFTAETLGVSGTMDLLDWSSLIDSRTKLSKHLVVPNAQTGQL--EPLLSRFTEE 267
Query: 505 VQVTEARCFYGFQIAMENVHSEMYSLLID 591
++ R + + L++D
Sbjct: 268 EELQMTRMLQRMDVLAKKATEMGVRLMVD 296
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,033,471
Number of Sequences: 1657284
Number of extensions: 15741339
Number of successful extensions: 42218
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 40478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42132
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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