Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_K07
(838 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1045 - 8241862-8242881 247 7e-66
06_01_0189 + 1470006-1470989 246 2e-65
01_06_0920 - 33009183-33009335,33009421-33009741,33010221-330103... 32 0.65
06_03_0107 + 16709543-16709640,16712555-16713408,16715051-167151... 31 1.5
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 30 2.0
07_01_0698 - 5269329-5269579,5270673-5270928,5271158-5271725,527... 29 4.6
05_03_0104 - 8426374-8426542,8426656-8426828,8427020-8427103,842... 29 4.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.6
07_01_0431 + 3283252-3283274,3283684-3283819,3285839-3286682,328... 28 8.0
04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572... 28 8.0
03_06_0432 + 33879916-33880348,33881620-33881936,33882195-338822... 28 8.0
>06_01_1045 - 8241862-8242881
Length = 339
Score = 247 bits (605), Expect = 7e-66
Identities = 119/196 (60%), Positives = 138/196 (70%), Gaps = 1/196 (0%)
Frame = +1
Query: 253 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFI 429
+EPLL E+ RF +FPI+YP IW+ YKKA ASFWT EEVDLS D W+ L ERHFI
Sbjct: 14 EEPLLAESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 430 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDP 609
HVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+EN+HSEMYSLL++TYIRD
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 610 KERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLK 789
E+D LF A++T+P V++KADWA++WI F ER WLK
Sbjct: 134 AEKDRLFRAIDTVPAVRRKADWAMRWI-DGGERFAERLVAFACVEGIFFSGSFCAIFWLK 192
Query: 790 KRGLMPGLTFXNELIS 837
KRGLMPGLTF NELIS
Sbjct: 193 KRGLMPGLTFSNELIS 208
>06_01_0189 + 1470006-1470989
Length = 327
Score = 246 bits (602), Expect = 2e-65
Identities = 118/196 (60%), Positives = 138/196 (70%), Gaps = 1/196 (0%)
Frame = +1
Query: 253 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFI 429
+EPLL E+ RF +FPI+YP IW+ YKKA ASFWT EEVDLS D W+ L ERHF+
Sbjct: 2 EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFV 61
Query: 430 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDP 609
HVLAFFAASDGIV ENL RF +VQV EAR FYGFQIA+EN+HSEMYSLL++TYIRD
Sbjct: 62 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDD 121
Query: 610 KERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLK 789
E+D LF A++T+P V++KADWA++WI F ER WLK
Sbjct: 122 VEKDRLFRAIDTVPAVRRKADWAMRWI-DGGERFAERLVAFACVEGIFFSGSFCAIFWLK 180
Query: 790 KRGLMPGLTFXNELIS 837
KRGLMPGLTF NELIS
Sbjct: 181 KRGLMPGLTFSNELIS 196
>01_06_0920 -
33009183-33009335,33009421-33009741,33010221-33010343,
33010476-33010634,33010720-33011086,33011162-33011315,
33011782-33012874
Length = 789
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 585 YRYLHQRSEGERFSV*CG*DSSLCKEESRLGS-TVDCKQDCNIW*KDCCLCSCXRNLFLR 761
+R L Q ++ RF + LC++++ G KQ+C + D C CSC + L
Sbjct: 184 HRALVQGTQQHRFEI-------LCQDKAGRGIYRKRVKQECVLKADDTCHCSCAKPKLLH 236
Query: 762 QFCFHLLAQKA 794
+ C H++A A
Sbjct: 237 RPCTHVIAAAA 247
>06_03_0107 +
16709543-16709640,16712555-16713408,16715051-16715193,
16715312-16715573,16715835-16716150,16716257-16716383,
16717088-16717149,16717291-16717374,16717438-16717494,
16717705-16717768,16718057-16718152
Length = 720
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 145 RVQTKSPMKNSVLATKNDNLTEEM-DLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIW 321
R+ + P +N+V+ T++D+L E + D + + + E RENP + I+YP+ W
Sbjct: 55 RLPVQLPFENNVIFTEDDDLEEVIEDPNSSTTKLTAWLEAN-RENPSARQLTYIEYPEHW 113
Query: 322 QMYKKAEASFW 354
+ + +W
Sbjct: 114 TWHN--QGKYW 122
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 585 YRYLHQRSEGERFSV*CG*DSSLCKEESRLGS-TVDCKQDCNIW*KDCCLCSCXRNLFLR 761
+R L Q ++ +RF + LC++++ G KQ+C + C CSC + L
Sbjct: 72 HRALVQGTQQQRFEI-------LCQDKAGRGIYRKRVKQECVLKANGTCHCSCAKPKLLH 124
Query: 762 QFCFHLLAQKA 794
+ C H++A A
Sbjct: 125 RPCTHVIAAAA 135
>07_01_0698 -
5269329-5269579,5270673-5270928,5271158-5271725,
5271757-5272763
Length = 693
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 215 ISSVKLSFFVANTLFFMGDFVCTRFSPLIP 126
IS+ LS VA +L+ + F+CTR+ L P
Sbjct: 342 ISTTMLSCIVARSLYGLVSFLCTRYRGLTP 371
>05_03_0104 -
8426374-8426542,8426656-8426828,8427020-8427103,
8427110-8427205,8427530-8427616,8428639-8428767,
8428922-8429098,8429185-8429295,8429642-8429761,
8430767-8432427,8432485-8432867,8433707-8434470,
8434532-8434813,8436158-8436493
Length = 1523
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = -2
Query: 333 LVHLPYIGVLNREDDKAPRVLPQQRFLLWVEL-----FEIFIEVHFLSQIVIFRSQYTI 172
L+HL Y+G+++ K PR + +FL ++L E+ EV L+Q+V R+ + I
Sbjct: 769 LLHLRYLGLVDTYITKLPREVRYLKFLQTLDLRGSRIKELPEEVGLLTQLVCLRADWEI 827
>04_03_0018 -
9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = -1
Query: 535 HRNILPQ*LELLVKISQPSFHLQCHLKPQRKQGHA**NVSHYLLRFPSLINPWTNRLPRR 356
H ++ P L + +SQ SF + P H + H+ L PSLI PW RL +
Sbjct: 795 HPSLRP--LRTVSSLSQSSFEEYLDISPPSPTFHEK-HQQHFNLDPPSLIPPWQLRLAKT 851
Query: 355 SKTKLQLSCTFA 320
+ ++ CT +
Sbjct: 852 KENEI-YPCTLS 862
>07_01_0431 +
3283252-3283274,3283684-3283819,3285839-3286682,
3286785-3286856,3286906-3286937,3287020-3287433
Length = 506
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 541 QIAMENVHS-EMYSLLIDTYIRDPKERDFLFNAVETLP 651
+I +E+V E+Y ++ D ++++PK D L + LP
Sbjct: 27 EILLEDVKKREIYEIMEDHWVQEPKAMDILNRIISLLP 64
>04_01_0438 -
5723451-5723759,5723795-5723863,5724025-5724210,
5724297-5724558,5724662-5724960,5725040-5725453,
5725533-5725899,5726002-5726146,5726562-5727558
Length = 1015
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 585 YRYLHQRSEGERFSV*CG*DSSLCKEESRLGS-TVDCKQDCNIW*KDCCLCSCXRNLFLR 761
+R L Q ++ RF V LC++++ G KQ+C + C CSC + L
Sbjct: 165 HRALVQGTQQHRFEV-------LCQDKAGRGIYRKRVKQECVLKDDGTCHCSCRKPTLLH 217
Query: 762 QFCFHLL--AQKAGPYAGTYI 818
+ C H++ A + G Y+
Sbjct: 218 RPCTHVISAASECGIQDAVYV 238
>03_06_0432 +
33879916-33880348,33881620-33881936,33882195-33882281,
33882690-33883253
Length = 466
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 657 KEESRLG-STVDCKQDCNIW*K-DCCLCSCXRNLFLRQFCFHLLAQKA 794
+++S +G T D +C +W + C C+C + C H LA A
Sbjct: 357 RDKSGVGIGTTDITLECTLWPEYHACKCNCNKPYLRHLPCSHALAASA 404
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,285,724
Number of Sequences: 37544
Number of extensions: 433494
Number of successful extensions: 1069
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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