Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K07
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p pro...   340   1e-93
AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA...   340   1e-93
U09370-1|AAA56996.1|  214|Drosophila melanogaster ribonucleoside...   182   5e-46
AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p pro...    33   0.37 
AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p pro...    33   0.37 
AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA...    33   0.37 
BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p pro...    31   1.5  
AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2 pro...    31   1.5  

>AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p
           protein.
          Length = 393

 Score =  340 bits (836), Expect = 1e-93
 Identities = 157/206 (76%), Positives = 171/206 (83%)
 Frame = +1

Query: 220 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 399
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLSKDL+DW 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 400 TLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 579
            LKD ERHFI HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 580 LLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXX 759
           +LIDTYIRDP +R++LFNA+ET+P VK+KADWAL WI+SK+A FGER             
Sbjct: 182 VLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFS 241

Query: 760 XXXXXXXWLKKRGLMPGLTFXNELIS 837
                  WLKKRGLMPGLTF NELIS
Sbjct: 242 GSFASIFWLKKRGLMPGLTFSNELIS 267


>AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA
           protein.
          Length = 393

 Score =  340 bits (836), Expect = 1e-93
 Identities = 157/206 (76%), Positives = 171/206 (83%)
 Frame = +1

Query: 220 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 399
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLSKDL+DW 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 400 TLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 579
            LKD ERHFI HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 580 LLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXX 759
           +LIDTYIRDP +R++LFNA+ET+P VK+KADWAL WI+SK+A FGER             
Sbjct: 182 VLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFS 241

Query: 760 XXXXXXXWLKKRGLMPGLTFXNELIS 837
                  WLKKRGLMPGLTF NELIS
Sbjct: 242 GSFASIFWLKKRGLMPGLTFSNELIS 267


>U09370-1|AAA56996.1|  214|Drosophila melanogaster
           ribonucleoside-diphosphate reductasesmall subunit
           protein.
          Length = 214

 Score =  182 bits (443), Expect = 5e-46
 Identities = 84/119 (70%), Positives = 94/119 (78%)
 Frame = +1

Query: 481 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVK 660
           LVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS+LIDTYIRDP +R++LFNA+ET+P VK
Sbjct: 1   LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60

Query: 661 KKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLKKRGLMPGLTFXNELIS 837
           +KADWAL WI+SK+A FGER                    WLKKRGLMPGLTF NELIS
Sbjct: 61  RKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELIS 119


>AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +1

Query: 154 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 333
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 334 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 438
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +1

Query: 154 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 333
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 334 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 438
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +1

Query: 154 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 333
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 334 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 438
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +1

Query: 202 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSK 381
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 382 DLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENV 561
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 562 HSEMYSLL 585
            S++   L
Sbjct: 116 MSKLVQTL 123


>AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +1

Query: 202 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSK 381
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 382 DLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENV 561
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 562 HSEMYSLL 585
            S++   L
Sbjct: 116 MSKLVQTL 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,591,994
Number of Sequences: 53049
Number of extensions: 745456
Number of successful extensions: 2474
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2471
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)