Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K07
         (838 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    26   0.50 
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    25   1.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    25   1.1  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   3.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   3.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.1  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 295 FPIQYPDIWQMYKKAEASFWTVEEVDLSKD 384
           FP Q P  W++ K AE + + V E DLS D
Sbjct: 217 FPYQPPFAWKILKAAEEAGFGVSE-DLSGD 245


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 544 IAMENVHSEMYSLLIDTYIRDPKERDFL 627
           I+ +    + Y  +ID ++R PKE+ FL
Sbjct: 43  ISKQISEEQRYKGMIDCFVRIPKEQGFL 70


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 544 IAMENVHSEMYSLLIDTYIRDPKERDFL 627
           I+ +    + Y  +ID ++R PKE+ FL
Sbjct: 43  ISKQISEEQRYKGMIDCFVRIPKEQGFL 70


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 384 FIRLGNLKR**ETFHQACPCFLCG 455
           ++ LG LK    T    C C LCG
Sbjct: 26  YVSLGALKMHIRTHTLPCKCHLCG 49


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +3

Query: 732 CSCXRNLFLRQFCFHLLAQKAGPYAGTYI 818
           C C + + L+   +H+L      Y+G  I
Sbjct: 609 CRCVKGILLKSGLYHVLRGNENIYSGKLI 637


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 346 SFWTVEEVDLSKDL 387
           +FWT  +VDLS+ L
Sbjct: 450 TFWTKSDVDLSRGL 463


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 286 SAAGSPAAEVPFVGRTLRN 230
           +A G P  +VP V R LRN
Sbjct: 66  TADGHPVNDVPGVRRVLRN 84


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 286 SAAGSPAAEVPFVGRTLRN 230
           +A G P  +VP V R LRN
Sbjct: 66  TADGHPVNDVPGVRRVLRN 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,638
Number of Sequences: 438
Number of extensions: 4528
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)