BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_K06
(630 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles ... 189 5e-50
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 24 4.6
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 24 4.6
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 24 4.6
>U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S8 mRNA, complete cds.
).
Length = 135
Score = 189 bits (461), Expect = 5e-50
Identities = 87/126 (69%), Positives = 107/126 (84%)
Frame = +3
Query: 252 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAE 431
RK RIIDVVYNASNNEL+RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K+ +L E
Sbjct: 3 RKARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGE 60
Query: 432 EAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPXQCGRADGYILXGK 611
E +++KKR++ RKY+ RQ+ AK++ A+ EQF+ GRLLAC++SRP Q GRADGYIL GK
Sbjct: 61 EDVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQVGRADGYILEGK 120
Query: 612 ELEFYL 629
ELEFYL
Sbjct: 121 ELEFYL 126
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 341 YNNCILDKGLCTHQ 300
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 341 YNNCILDKGLCTHQ 300
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 341 YNNCILDKGLCTHQ 300
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,380
Number of Sequences: 2352
Number of extensions: 13800
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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