Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K03
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1367 + 29607008-29607501,29608726-29608906,29609006-296090...    56   2e-08
05_03_0674 - 16842301-16842320,16842651-16842714,16842843-168429...    36   0.027
10_08_0507 + 18401266-18401341,18401448-18401633,18401918-184019...    31   1.4  
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13...    31   1.4  
09_02_0158 - 5102148-5103818                                           29   5.5  
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77...    28   7.3  

>06_03_1367 +
           29607008-29607501,29608726-29608906,29609006-29609065,
           29609486-29609649,29609723-29609888,29609889-29609957,
           29610060-29610155,29610345-29610389,29610765-29610835,
           29610996-29611062,29611150-29611200,29611276-29611686
          Length = 624

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 32/108 (29%), Positives = 54/108 (50%)
 Frame = +2

Query: 455 PMTGWRSKLRFSILSLMRLVVVAAGFHRVRILGRQHQAGSSREAPVVVMAPHSSFFDAIA 634
           PM  WR +L +      R ++ + G+H +R  G+     + RE   +V++ H S+ + I 
Sbjct: 141 PMPAWRRRLMWITRISARCILFSFGYHWIRRKGKP----APRELAPIVVSNHVSYIEPIY 196

Query: 635 IVCLGAPSVVAKADTARIPFIGQLINYTQPVYVWRDDPNSRXNTIKEI 778
                 P++V+      IPF+G +I   Q +YV R  P SR + + EI
Sbjct: 197 FFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDRFSPASRKSAVNEI 244


>05_03_0674 -
           16842301-16842320,16842651-16842714,16842843-16842983,
           16843382-16843515,16844437-16844501,16844886-16844923,
           16845029-16845148,16846129-16846458
          Length = 303

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +2

Query: 557 QHQAGSSREA-PVVVMAPHSSFFDAIAIVCLGAPSVVAKADTARIPFIGQLINYTQPVYV 733
           +HQ  S     P  V++ H S+ D +  +    PS VAK   AR+P +G +      ++V
Sbjct: 112 EHQEQSKELGRPGAVVSNHVSYVDILYHMSSSFPSFVAKRSVARLPMVGLISKCLGCIFV 171

Query: 734 WRDDPNSRXNTIKE 775
            R+   S    + E
Sbjct: 172 QRESKTSDFKGVSE 185


>10_08_0507 +
           18401266-18401341,18401448-18401633,18401918-18401953,
           18402244-18402650,18402998-18403099,18403206-18403433
          Length = 344

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +2

Query: 530 FHRVRILGRQHQAGSSREAPVVVMAPHSSFFDAIAIVCLG-APSVVAKADTARIPFIGQL 706
           F+++ + G ++   +S  +P V +A H SF D   ++ LG     ++K      P IG  
Sbjct: 160 FYKLDVEGMENLPPNS--SPAVYVANHQSFLDIYTLLTLGRCFKFISKTSIFMFPIIGWA 217

Query: 707 INYTQPVYVWRDDPNSRXNTIKEII 781
           +     + + R D  S+ + +K  +
Sbjct: 218 MYLLGVIPLRRMDSRSQLDCLKRCV 242


>06_01_0007 +
           130582-131544,132187-132264,132615-132732,133228-133271,
           133389-133448,133536-133588,133671-133837,133963-134167,
           134989-135046,135225-135281,135363-135608,135938-136002,
           136090-136158,136238-136331,136467-136607,137159-137304,
           137452-138110,138222-138335,138406-138560
          Length = 1163

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 30  CSXRAVCSSFAARKSLXTHHKLKS-NKFSINVS 125
           C+ R  C S    K++  HHKLKS   F +NV+
Sbjct: 334 CNIRCFCLSCNGSKNIFLHHKLKSLEAFCVNVA 366


>09_02_0158 - 5102148-5103818
          Length = 556

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
 Frame = +1

Query: 643 PRGSQ-RGSEGGHSSYTVHWT---IDKLH 717
           P  +Q RG  GG SSY+  WT   ID++H
Sbjct: 5   PNSAQARGGNGGMSSYSTSWTDVVIDRIH 33


>01_01_0103 -
           773727-774737,774797-774813,774852-775078,777465-778237
          Length = 675

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 488 SILSLMRLVVVAAGFHRVRILGRQHQ 565
           ++L ++ LVV  A  H VR+ GR+HQ
Sbjct: 8   TVLYVLALVVADADHHVVRVQGRRHQ 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,428,890
Number of Sequences: 37544
Number of extensions: 428822
Number of successful extensions: 1502
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)