Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K02
         (428 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AL117204-27|CAB55133.2|  241|Caenorhabditis elegans Hypothetical...    27   7.5  

>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 190  INKKLLISLFNRMNDAENSTASKTLQNGDDNESDEWED 303
            +NK+L   LFNR ++     A+  +Q G D+    W +
Sbjct: 1069 LNKELTEKLFNRFHEVALDLAALNIQRGRDHGLPSWTE 1106


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 190  INKKLLISLFNRMNDAENSTASKTLQNGDDNESDEWED 303
            +NK+L   LFNR ++     A+  +Q G D+    W +
Sbjct: 1069 LNKELTEKLFNRFHEVALDLAALNIQRGRDHGLPSWTE 1106


>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical
           protein ZK897.1 protein.
          Length = 1396

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 192 YVICLSRFAWWKFRYRFFRSLRCNNFVF 109
           Y  C+ R AW K++ RFF  ++ + + F
Sbjct: 630 YCYCIGRNAWKKWKKRFFCLVQVSQYAF 657


>AL117204-27|CAB55133.2|  241|Caenorhabditis elegans Hypothetical
           protein Y116A8C.43 protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 180 LSRFAWWKFRYRFFRSLRCNNFVF 109
           LS +  W+    FF   +CNNFVF
Sbjct: 71  LSEYFTWEESGTFFPFQKCNNFVF 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,100,490
Number of Sequences: 27780
Number of extensions: 120454
Number of successful extensions: 294
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)