Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_K01
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.40 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = +1

Query: 52  IICLFYW*LVKLEYCCCVILKAINIL 129
           ++C++Y+  + L +CC  I+  +++L
Sbjct: 255 LVCIYYFYYMHLLFCCAFIIFTMHLL 280


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 221 NLLYSCFFFYFLKGL*TMIS 162
           NL Y CF FY+L  +  M S
Sbjct: 320 NLFYLCFCFYWLLVMVAMFS 339


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 221 NLLYSCFFFYFLKGL*TMIS 162
           NL Y CF FY+L  +  M S
Sbjct: 276 NLFYLCFCFYWLLVMVAMFS 295


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -2

Query: 195 LLSEGSLNNDFNNMICVFIFEV*NIYSFQYDATTVFKFHK 76
           + S+    N+ +  I +  F+  ++Y F Y    V  F+K
Sbjct: 51  IYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYK 90


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 619 IPRWHIDDTVHVYVT 663
           +PRW+I  T+ V +T
Sbjct: 37  VPRWYICYTIGVIIT 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,956
Number of Sequences: 336
Number of extensions: 4182
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)