Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_K01
(796 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces pom... 37 0.003
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 30 0.44
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 26 7.1
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 26 7.1
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 26 7.1
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 26 7.1
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 25 9.4
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.4
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 25 9.4
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 25 9.4
>SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 266
Score = 37.1 bits (82), Expect = 0.003
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +2
Query: 368 FLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITA 547
F+S +V GL++ + P N +L F G+++G + + S II+ A
Sbjct: 102 FISLVVLFGLIMKPYSYPRN-------YIFLFLFTALEGLTLGTAITFFSA---RIILEA 151
Query: 548 LLGTTLVFVCFSAAAMLAERGSWXXXXXXXXXXXXSMSLMTLVNLFMQSH-FLYQAHLYL 724
+ T VFV +A + + + S+ L L+ F+ S F+ A
Sbjct: 152 VFITLGVFVALTAFTFQS-KWDFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGF 210
Query: 725 GLMLMCGFVLFDTQLIIEK 781
G ++ CG++LFDT I+ +
Sbjct: 211 GTLVFCGYILFDTYNILHR 229
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 29.9 bits (64), Expect = 0.44
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +2
Query: 212 TINFQTFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLSAIVGA 391
TI+ ++F E + ++ N+ + ++ + A+ V V++ TR + IVG
Sbjct: 730 TIDIESFWTPVDVVEEKSAKTYIDNLVGVMRLSVIKANDLVNVELPTRKSDPYARVIVGN 789
Query: 392 GLMLMLIATPDN 427
++ + TP+N
Sbjct: 790 SVVARTVYTPNN 801
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 751 YKTAHEHEAKIKMSLVQE 698
Y TAH +E K K+ L+QE
Sbjct: 291 YPTAHPYEIKTKLYLIQE 308
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 55 ICLFYW*LVKLEYCCCVILKAINIL 129
ICLF L+ L YC +++KAI ++
Sbjct: 128 ICLFVLLLLGLIYCSKIVVKAIPLI 152
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 55 ICLFYW*LVKLEYCCCVILKAINIL 129
ICLF L+ L YC +++KAI ++
Sbjct: 128 ICLFILLLLGLIYCSKIVVKAIPLI 152
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 55 ICLFYW*LVKLEYCCCVILKAINIL 129
ICLF L+ L YC +++KAI ++
Sbjct: 128 ICLFVLLLLGLIYCSKIVVKAIPLI 152
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 144 FIFEV*NIYSFQYDATTVFKFHKLPIKQTNNFRT 43
FI E+ I+ A T F FH LP+++ +F T
Sbjct: 748 FISELCVIHMLDVRAITNFLFHLLPLEKFESFLT 781
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = -2
Query: 648 NSVINVPPRNSQL--PRSASIAAAEKHTNTRV--VPSRAVIMIDGSTTLTYS--SRGPML 487
N+ + +PPR + R +++ + ++ V VPS + ++ TT S SR PML
Sbjct: 318 NNPVYLPPRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTTSVPSGMSRHPML 377
Query: 486 MPDVNPNPS 460
M P PS
Sbjct: 378 MNPSTPEPS 386
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 131 TSNIKTQIILLKSLFRDPSESKKKNMNTIN 220
TS+ T+ L F +PS+S K ++TIN
Sbjct: 189 TSSFNTRSPLRNHNFSNPSKSSKNGVHTIN 218
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 268 NWWFQSILKAVDKGLKIYCIHVFFFTF 188
NWW++S + G+ ++ VF++ F
Sbjct: 553 NWWWRSFITPGFCGIYVFIFSVFYWFF 579
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,203,595
Number of Sequences: 5004
Number of extensions: 66450
Number of successful extensions: 174
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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