Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_J22
         (515 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta...    30   4.2  
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4...    30   4.2  
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4...    30   4.2  
AL117481-1|CAB55954.1|  319|Homo sapiens hypothetical protein pr...    30   5.5  
AL662885-1|CAI41449.1|  475|Homo sapiens zinc finger, CCHC domai...    29   9.7  
AK126720-1|BAC86657.1|  186|Homo sapiens protein ( Homo sapiens ...    29   9.7  
AK096184-1|BAC04719.1|  475|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
           containing 4 protein.
          Length = 1048

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 98  SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 193
           +GP+LV   G    T +++KAP   SW+T+ G
Sbjct: 246 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 276


>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
           protein.
          Length = 1049

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 98  SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 193
           +GP+LV   G    T +++KAP   SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277


>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
           protein.
          Length = 1049

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 98  SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 193
           +GP+LV   G    T +++KAP   SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277


>AL117481-1|CAB55954.1|  319|Homo sapiens hypothetical protein
           protein.
          Length = 319

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 459 PPRSAPTEAPS--GLTPRPFCALRRARPTRYGLMIPN*KFSITR 334
           PPR++PT  PS   LT  P  A     P+R  LM      SITR
Sbjct: 23  PPRASPTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITR 66


>AL662885-1|CAI41449.1|  475|Homo sapiens zinc finger, CCHC domain
           containing 5 protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -3

Query: 498 YQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYGLMI 361
           YQ + A LE+L LPP   P E PS    + F  L  A+ +  GL++
Sbjct: 173 YQETAAQLEFLELPPPQEPLE-PS--NAQEFLELSAAQESLEGLIV 215


>AK126720-1|BAC86657.1|  186|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44766 fis, clone BRACE3032537. ).
          Length = 186

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -3

Query: 489 SRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYGLMIPN*K 349
           +RA+L  L  PP   P   P G  P   C L R  P++ G + P+ K
Sbjct: 143 ARATLTPLAAPPLLPPEPTPHGNQP---CGLSRCDPSKRGALGPDMK 186


>AK096184-1|BAC04719.1|  475|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38865 fis, clone MESAN2012735. ).
          Length = 475

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -3

Query: 498 YQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYGLMI 361
           YQ + A LE+L LPP   P E PS    + F  L  A+ +  GL++
Sbjct: 173 YQETAAQLEFLELPPPQEPLE-PS--NAQEFLELSAAQESLEGLIV 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,093,920
Number of Sequences: 237096
Number of extensions: 1868554
Number of successful extensions: 4352
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4348
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)