Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_J19
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847    128   6e-30
02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208...    46   4e-05
06_03_1305 + 29197615-29197779,29198621-29198674,29198781-291988...    38   0.013
03_01_0581 + 4310136-4310186,4310940-4311144,4311245-4311410,431...    31   0.88 

>08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847
          Length = 426

 Score =  128 bits (309), Expect = 6e-30
 Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
 Frame = +1

Query: 280 MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKI--AQNGIVCSI 453
           MAK+GEGD RWIV+ER D TNV+NWHW E++   WS+ RL  L + L +   + G+    
Sbjct: 1   MAKYGEGDARWIVQERADGTNVHNWHWAERDCLEWSRSRLTSLLAGLPVLSGEGGLALRT 60

Query: 454 TEVEKVDGEASANNRKGKLIFFYEWDIKLKW--EGVLAGGSEKIKGEIHIPNLSEENDVS 627
           T ++K+DGEA  N RKGK+I  YE  + L W  E     G  K+ G   +P L++EN   
Sbjct: 61  TALDKLDGEAYVNIRKGKVIPGYELSLTLAWEAEATTESGVVKVSGAAEVPYLADENADE 120

Query: 628 EVDMTVTIK-SNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSV 804
           + ++ VT++  +G  A+R K      G+  + ++++EY+ ++    +KG     + +S  
Sbjct: 121 DPELRVTVRGDDGPVARRAKDAFLTKGKPLVLEKIREYVAAM----AKGGPAKDELDSKK 176

Query: 805 KPDNVSTITSG 837
            P   + + +G
Sbjct: 177 TPTKAAAVEAG 187


>02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,
            2083223-2083292,2083429-2083509,2083768-2083821,
            2084864-2085067,2086272-2086366,2086976-2086997,
            2087492-2087585,2087677-2087764,2087874-2087979,
            2088103-2088189,2088261-2088309,2088418-2088521,
            2088605-2088697,2088900-2088974,2089316-2089384,
            2090182-2090250,2090339-2090374,2090471-2090565,
            2090836-2090911,2091067-2091153,2091287-2091355,
            2091654-2091731,2091836-2091925,2092436-2092642,
            2092736-2092879
          Length = 841

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
 Frame = +1

Query: 358  WTEKNAGPWSKDRLKELFSDLKIAQNGI-VCSITEVEKVDGEA---SANNRKGKLIFFYE 525
            W EKN   W+  R+KE+   L   +      S+  V K  G+A   +  N+K ++ + YE
Sbjct: 683  WEEKNLNSWANSRIKEMLGSLDSLEFPTGKASLDGVSKCIGDAFLVTVRNKK-RVGYTYE 741

Query: 526  WDIKLKWEGVLAGGSEKIKGEIHIPNLS-EENDVSEVDMTVTIK---SNGDEAQRVKAFM 693
              +K K E ++     K+KG + IP  S  E +  EV++  T     ++ D+ Q  K   
Sbjct: 742  LSLKFKGEWLIKEEKMKVKGHLDIPEFSFGELEDLEVEVRFTDDKGLASDDKRQICKDLK 801

Query: 694  HHVGREEIRKQLQEYIRSLKEEFSK 768
              +    IR++L+ +   LK+   K
Sbjct: 802  SFL--SPIREKLRAFEEELKDRSLK 824


>06_03_1305 +
           29197615-29197779,29198621-29198674,29198781-29198861,
           29200167-29200409,29200576-29200710
          Length = 225

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 358 WTEKNAGPWSKDRLKELFSDLKIAQNGI-VCSITEVEKVDGEASANNRKGKLIFFYEWDI 534
           W EKN   W+  R+K+L   L   +      S+ EV K  G+A     + K    Y +++
Sbjct: 59  WEEKNLNSWANGRIKDLLGSLDPLEFSTGKASVYEVSKCSGDAFLVTVRNKKRVGYTYEL 118

Query: 535 KLKWEG 552
            LK++G
Sbjct: 119 GLKFKG 124


>03_01_0581 +
           4310136-4310186,4310940-4311144,4311245-4311410,
           4312035-4312257,4312891-4312967,4313091-4313278,
           4313363-4313457,4313674-4313807,4313914-4314024,
           4314304-4314619,4314919-4315040,4315183-4315293,
           4315824-4316012,4316105-4316263,4316449-4316530,
           4317080-4317190
          Length = 779

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +1

Query: 586 EIHIPNLSEENDVSE-VDMTVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEF 762
           E+H P   +  D  E +  T+ I+  G  A   K F    G+ +   Q QE++R+L+  +
Sbjct: 490 ELHAPLADDLMDFYERMGDTLAIQYGGSAAHN-KIFCEQRGQWKAATQSQEFLRTLQRYY 548

Query: 763 SKGLILPKKGES 798
           S     P+K +S
Sbjct: 549 SNAYTDPEKQDS 560


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,084,919
Number of Sequences: 37544
Number of extensions: 425194
Number of successful extensions: 1201
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)