Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_J19
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81030-6|CAB02710.1| 342|Caenorhabditis elegans Hypothetical pr... 204 8e-53
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 28 7.3
Z48582-6|CAN99695.1| 135|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 28 7.3
Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z81030-6|CAB02710.1| 342|Caenorhabditis elegans Hypothetical
protein C01G10.8 protein.
Length = 342
Score = 204 bits (497), Expect = 8e-53
Identities = 97/182 (53%), Positives = 126/182 (69%)
Frame = +1
Query: 280 MAKWGEGDPRWIVEERPDATNVNNWHWTEKNAGPWSKDRLKELFSDLKIAQNGIVCSITE 459
MAKWGEGDPRWIVEER DATNVNNWHW+EKNA PWS +RL+EL + IV +I E
Sbjct: 1 MAKWGEGDPRWIVEERADATNVNNWHWSEKNATPWSLNRLRELLTGFSSEDGPIVVTIDE 60
Query: 460 VEKVDGEASANNRKGKLIFFYEWDIKLKWEGVLAGGSEKIKGEIHIPNLSEENDVSEVDM 639
++K+DGEA+ANNRK KLIF +EW I+ + ++G ++ KG IPNLS+END SEVD+
Sbjct: 61 IKKIDGEATANNRKAKLIFLFEWVIEGTFIARVSGSEDEYKGTFDIPNLSDENDASEVDV 120
Query: 640 TVTIKSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDNV 819
++ NG A +++ ++ +I+ + YIR LKEEFSKGLILP VKP V
Sbjct: 121 NSSLSGNGPMAHQIRQVLNKSFIAKIQDVMGIYIRELKEEFSKGLILP---TDKVKPQVV 177
Query: 820 ST 825
+T
Sbjct: 178 TT 179
>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical protein
F54G8.3 protein.
Length = 1139
Score = 32.3 bits (70), Expect = 0.45
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Frame = +1
Query: 397 LKELFSDLKIAQNGIVCSITEVEKVDGEASANNRKGKLI---FFYEWDIKLKWEGVLAGG 567
LK F D+ + NG V ++ E + +D + N+K K F+ E++ + + E G
Sbjct: 675 LKAAFKDIPLTSNGYVSNVGEKDYLDLTFTVENKKEKAYQANFYLEYN-EEELELPQVQG 733
Query: 568 SEKI------KGEIHIPNLSEENDVSEVDMTVTIKSNGDEAQRV-KA--FMHHVGREEIR 720
S+++ K +H+P + N S+ T+ K + + KA FM HV
Sbjct: 734 SKRMIAETIGKNIVHLPLGNPMNGASKHQFTIQFKLTRGRTEGIGKALKFMAHV--NSTS 791
Query: 721 KQLQEYIRSLKEEFSKGLILPKKGESSV 804
++ +E ++ K E +I KK E +
Sbjct: 792 QETEEELKDNKWEAEVQII--KKAELEI 817
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 610 EENDVSEVDMTVTIKSNGDEAQRVKAFMHHVGREE-IRKQLQEYIRSLKEEFSK 768
E+ + ++++MT IK DE ++ K + +EE I+K+++E + KEE K
Sbjct: 240 EKVEKNKMEMTEKIKKK-DEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEK 292
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +1
Query: 559 AGGSEKIKGEIHIPNLSEENDVSEV--DMTVTIKSNGD----EAQRVKAFMHHVGREEIR 720
AG K+K H+P+ S + S+ D + GD E +++ A M H+G ++ +
Sbjct: 258 AGDVMKMK-RYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAK 316
Query: 721 KQLQEYIRSLKE--EFSKGLILPKKGESSVKPD 813
++ QE+ L E +F + L +P E V+ +
Sbjct: 317 RKEQEFELLLDEKVDFIQALQMPGTNEEVVETE 349
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +1
Query: 559 AGGSEKIKGEIHIPNLSEENDVSEV--DMTVTIKSNGD----EAQRVKAFMHHVGREEIR 720
AG K+K H+P+ S + S+ D + GD E +++ A M H+G ++ +
Sbjct: 258 AGDVMKMK-RYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAK 316
Query: 721 KQLQEYIRSLKE--EFSKGLILPKKGESSVKPD 813
++ QE+ L E +F + L +P E V+ +
Sbjct: 317 RKEQEFELLLDEKVDFIQALQMPGTNEEVVETE 349
>Z48582-6|CAN99695.1| 135|Caenorhabditis elegans Hypothetical
protein F27E5.7 protein.
Length = 135
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 409 FSDLKIAQNGIVCSITEVEKVDGEASANNRKG 504
FSD ++ +N +VCSI + K + + + N +G
Sbjct: 25 FSDFRLPENTVVCSILQDTKCEWKQNWKNAEG 56
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +1
Query: 559 AGGSEKIKGEIHIPNLSEENDVSEV--DMTVTIKSNGD----EAQRVKAFMHHVGREEIR 720
AG K+K H+P+ S + S+ D + GD E +++ A M H+G ++ +
Sbjct: 258 AGDVMKMK-RYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAK 316
Query: 721 KQLQEYIRSLKE--EFSKGLILPKKGESSVKPD 813
++ QE+ L E +F + L +P E V+ +
Sbjct: 317 RKEQEFELLLDEKVDFIQALQMPGTNEEVVETE 349
>Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical
protein F02E9.3 protein.
Length = 319
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 715 IRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDNVSTITS 834
++KQL E RSLK + K E KP ++ TI S
Sbjct: 278 MKKQLDEIARSLKSSKKSRKSMKSKKEKKSKPASLKTIYS 317
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 27.9 bits (59), Expect = 9.7
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Frame = +1
Query: 376 GPWSKDRLKELFSDLKIAQNGIVCSITEVEKVDGEASANNRKGKLIFFYEWDIKLKWEGV 555
GP + DR+ L + K + SI E K +G+ +G + F + E
Sbjct: 157 GPLTDDRIAVLINLSKKISD---FSIEEENKPEGDGDIYENEGVNVQFDSDE-----EED 208
Query: 556 LAGGSEKIKGEIHIPNLSEENDVSEVDMTVTIKSNG---DEAQRVKAFMH--HVGREEIR 720
G +IKG+ SEE + + D T T+K +G ++ Q+ + +H + I+
Sbjct: 209 DGGMVNEIKGDSE--EESEEEEGVDTDYTATLKGDGHLTEDEQKARGILHPRDIDAHWIQ 266
Query: 721 KQLQEYIR 744
+ L +Y +
Sbjct: 267 RSLAKYFK 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,681,692
Number of Sequences: 27780
Number of extensions: 393612
Number of successful extensions: 1239
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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