Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_J10
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53334-1|AAA96168.1| 508|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 29 4.8
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 29 4.8
AC006684-7|AAF39961.1| 219|Caenorhabditis elegans Hypothetical ... 29 4.8
AC006684-4|AAF39966.1| 181|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U53334-1|AAA96168.1| 508|Caenorhabditis elegans Hypothetical
protein R105.1 protein.
Length = 508
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 477 NRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 626
N PY WR++ W P S ++ V F L + + N+ +C RP+
Sbjct: 176 NNSPYGYWRQITWCPKGSVIIAIQEK--VDFEKLDNAGITNLAAKCGRPQ 223
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3
Query: 477 NRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 626
N PY WR + W P S ++ FD + + N C RPE
Sbjct: 371 NDSPYGYWRSIQWCPKGSVIIGITEKIDSEKFD--NAGITNFGARCGRPE 418
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 165 MSEENKSILHELYVYSEWKPEPEYIQKPDNLLL----PENISSLWKWLKFFGPKKNL 323
MSE + +I E + S W P P+ + PD L EN S +W LK P +L
Sbjct: 229 MSETSDTI-REAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMDL 284
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 165 MSEENKSILHELYVYSEWKPEPEYIQKPDNLLL----PENISSLWKWLKFFGPKKNL 323
MSE + +I E + S W P P+ + PD L EN S +W LK P +L
Sbjct: 229 MSETSDTI-REAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMDL 284
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 165 MSEENKSILHELYVYSEWKPEPEYIQKPDNLLL----PENISSLWKWLKFFGPKKNL 323
MSE + +I E + S W P P+ + PD L EN S +W LK P +L
Sbjct: 266 MSETSDTI-REAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMDL 321
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 468 TTVNRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFN 599
+ +++DP+ W L S S +++ Y GF L S L N
Sbjct: 252 SAISKDPFDFWADLRGSYRTSILIVDYSTAFTGFVLLATSRLRN 295
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 468 TTVNRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFN 599
+ +++DP+ W L S S +++ Y GF L S L N
Sbjct: 252 SAISKDPFDFWADLRGSYRTSILIVDYSTAFTGFVLLATSRLRN 295
>AC006684-7|AAF39961.1| 219|Caenorhabditis elegans Hypothetical
protein T02H6.4 protein.
Length = 219
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 486 PYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 626
P+ WR++ W P+ + ++ G D + + N +C RPE
Sbjct: 81 PFGHWREIQWCPNGTVIIGIQTKSDRGRID--KAGITNFAAKCGRPE 125
>AC006684-4|AAF39966.1| 181|Caenorhabditis elegans Hypothetical
protein T02H6.7 protein.
Length = 181
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 486 PYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 626
P+ WR++ W P+ + ++ G D + + N +C RPE
Sbjct: 81 PFGHWREIQWCPNGTVIIGIQTKSDRGRID--KAGITNFAAKCGRPE 125
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 327 DSVTAHKENHQKWHIALGDEGKVIAVLTDNILEIRTKRSDYATIAARTTVNRDPYSQW 500
D AH+ N +W +A G+E + A L IR K D + +++T + D +++
Sbjct: 23 DDYCAHEFNVYRWLVAYGNEEEEAAKALKRHLNIR-KTIDLNSYSSKTELEEDELNKY 79
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 27.9 bits (59), Expect = 8.3
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Frame = +3
Query: 303 FGPKKNLIDSVTAHKENHQKWHIALGDEGKVIAV-LTDNILEIRTKRSDYATIAARTTVN 479
FG K ++ +V ++ H W + E KV+ V + D E + ++ + + +V
Sbjct: 2443 FGQKGHIKTTVGPNEFAHFSWSSII--EPKVLEVDIGDWHFEDKLDQNRFGDLQIDKSVR 2500
Query: 480 RDPY------SQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPEGLECS 641
R Y + R L+++PD AYG+ D+ A I ++ GL
Sbjct: 2501 RFSYYSNFLIGRQRVLLFTPDVDIAKAAYGSWETDVVDMQA----EISLQ---GFGLSVV 2553
Query: 642 DNTHAVADVIFMPLRVKDTKWNWEV 716
DN ++I+M + D W EV
Sbjct: 2554 DNI-VGREIIYMAISSSDILWEEEV 2577
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 27.9 bits (59), Expect = 8.3
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Frame = +3
Query: 303 FGPKKNLIDSVTAHKENHQKWHIALGDEGKVIAV-LTDNILEIRTKRSDYATIAARTTVN 479
FG K ++ +V ++ H W + E KV+ V + D E + ++ + + +V
Sbjct: 2470 FGQKGHIKTTVGPNEFAHFSWSSII--EPKVLEVDIGDWHFEDKLDQNRFGDLQIDKSVR 2527
Query: 480 RDPY------SQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPEGLECS 641
R Y + R L+++PD AYG+ D+ A I ++ GL
Sbjct: 2528 RFSYYSNFLIGRQRVLLFTPDVDIAKAAYGSWETDVVDMQA----EISLQ---GFGLSVV 2580
Query: 642 DNTHAVADVIFMPLRVKDTKWNWEV 716
DN ++I+M + D W EV
Sbjct: 2581 DNI-VGREIIYMAISSSDILWEEEV 2604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,305,282
Number of Sequences: 27780
Number of extensions: 364771
Number of successful extensions: 895
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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