Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_J09
(845 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 113 4e-26
SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces ... 89 6e-19
SPAC2G11.03c |vps45||vacuolar sorting protein Vps 45|Schizosacch... 61 2e-10
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 36 0.010
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 31 0.21
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 27 3.3
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 26 5.8
SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 7.7
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 26 7.7
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 113 bits (271), Expect = 4e-26
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Frame = +1
Query: 124 WSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 303
W VLIV + +++ +H + E I VE + R P + + +Y++ EK V +
Sbjct: 24 WKVLIVDTKTADIINHFITIHSLLEEKIAAVEILENPRTPNSSFEALYILHSEEKLVDCI 83
Query: 304 INDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAFIPYEQQVFSL 483
+ D R Y H+ F + + L N+L S+IA I+T++ + F E + F +
Sbjct: 84 LKDEEYDKR--YPGIHIVFLDMVKEPLINKLRTSRIASKIRTVQVAYLDFTSLESRYFQV 141
Query: 484 DSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRY-------RSDWERNVE 642
+ +Y+P+ A + ++A I ++C +LG P++R + +
Sbjct: 142 HDSFSGLRLYHPSNAAIIRQELSKVAHGIFSVCVSLGISPNIRCYYPKNAPHASKTMSFI 201
Query: 643 LAQLIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIE 822
LA + + ++ Y + P E K S L++DR D +P LHE T QAM +DLLPI+
Sbjct: 202 LANQLSEIVEEYCSKHPGYHEAASK--STCLIVDRSLDTAAPFLHEFTYQAMIHDLLPIK 259
Query: 823 NDVYXYD 843
N+ Y Y+
Sbjct: 260 NEQYPYE 266
>SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 639
Score = 89.4 bits (212), Expect = 6e-19
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 5/238 (2%)
Frame = +1
Query: 124 WSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 303
W VLI + +S+ ++ D+ G+T+ +I R+P+ + IY + P+++++ +
Sbjct: 46 WKVLIFDKAGSETISSVLRISDLRKHGVTVHMNITSFRQPIADVPAIYFVQPTQENIELI 105
Query: 304 INDFAVGNRIMYRAAHVFFTEACPDIL---FNEL-SRSQIAKYIKTLKEINIAFIPYEQQ 471
I D + G +Y +A+V F+ L F EL S++ + I + + + ++ E
Sbjct: 106 IEDLSKG---LYESAYVCFSSTISRALLEQFAELASKTNTSHMIHQVYDQYLNYVVLESD 162
Query: 472 VFSLDSPETFQCMYNPALAQTR-NANMERIAEQIATLCATLGEYPSVRYRSDWERNVELA 648
FSL P+ F +NP+ + N+ ++ I + ++ TLG P +R +
Sbjct: 163 FFSLQLPKIFHTFHNPSSDEALINSRVQDIVNGLFSVIVTLGTIPIIRCPQGSAAEMVAQ 222
Query: 649 QLIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIE 822
+L Q+ D + K R L++LDR D + + H T QA+ +D L ++
Sbjct: 223 KLNQRLKDHLMNTKDAFVSVNPKPRPILILLDRTVDLIPMINHSWTYQALIHDTLNMQ 280
>SPAC2G11.03c |vps45||vacuolar sorting protein Vps
45|Schizosaccharomyces pombe|chr 1|||Manual
Length = 558
Score = 61.3 bits (142), Expect = 2e-10
Identities = 48/232 (20%), Positives = 105/232 (45%)
Frame = +1
Query: 130 VLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHALIN 309
+L++ + + ++VS+C ++ + I L + KRE L + + + P+ ++ L
Sbjct: 23 ILLLEEDTTKIVSSCITQSNLLEQQIYLTVLLGNKREKLRHLKCVAFLRPTPTTLRLLCE 82
Query: 310 DFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAFIPYEQQVFSLDS 489
+ Y H++FT P L+ S + +K+++E + ++ + S +
Sbjct: 83 ELRDPK---YAEYHLYFTNVIPKSFLERLAESDDFEAVKSIQEFFLDYLVVNNDLASFNI 139
Query: 490 PETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKL 669
P + + ++ R + I +L +L + P +RY ++ ++LA+ + +
Sbjct: 140 PHIIE----DSPDNWQDGAFHRTHQGIISLLLSLKKKPVIRYDNNSLLCLKLAEEVSYTI 195
Query: 670 DAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIEN 825
+ + LL+LDR D ++PLL + T QAM ++L I+N
Sbjct: 196 ---QHESQLFNFRKPDTAPILLLLDRKNDPITPLLTQWTYQAMVHELFGIDN 244
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 35.5 bits (78), Expect = 0.010
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Frame = +1
Query: 211 LVEDIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRIM--YRAAHVFFTEACPDIL 384
+ +D+H + L ++DGI +T E+ + A G R++ + H++ +
Sbjct: 418 IYDDLHAFYKSLNSVDGISNLTIEEEELVNTDFSLAYGGRLLLSHTNLHLYRGHRYGVVG 477
Query: 385 FNELSRSQIAKYIKTLKEINIAFIPYEQQVF---SLDSPETFQCMYNPALAQ-----TRN 540
N +S + + I K N + F SL +T + + +AQ T N
Sbjct: 478 HNGCGKSTLLRAIGDYKVENFPSPDEVKTCFVAHSLQGEDTSMAILD-FVAQDKALLTMN 536
Query: 541 ANMERIAEQIATL--CATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPT 696
+ A+ + ++ A + E P W+ +ELA+ + QK D DEPT
Sbjct: 537 VTRQEAADALHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPT 590
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 31.1 bits (67), Expect = 0.21
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 484 DSP-ETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQ 660
D P ET C Y+ +LA + ++ TLCA Y S +Y+ + ++L IQ
Sbjct: 396 DKPKETMPCTYDSSLADDHSDTSNLSKDKANTLCAQCSVYLSEKYQQQ-QSLLQLESNIQ 454
Query: 661 QKLDAYKA 684
Q + KA
Sbjct: 455 QLENEKKA 462
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 148 LSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMD 258
++M +++C K H+I E L+ D K+ E CT++
Sbjct: 722 VTMDWINSCLKTHEIVDEEPYLLNDPEKELELGCTLE 758
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -1
Query: 671 SSFCWIS*ANSTLRSQSLRYRTEGYSPSVAQRVAICSAIRSMFALRVCARAGLYMHWNVS 492
++F W R SLR+ T S VA +A+ + + +MF + WN+
Sbjct: 184 TAFYWSVYEAQQKRPFSLRWHTSLLSTGVALGLALSTKLSAMFTFGWLLILAAFHLWNLL 243
Query: 491 GE 486
G+
Sbjct: 244 GD 245
>SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 112
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 229 KKREPLCTMDGIYLITPSEKSVHALIN 309
KK E + + +TPSE+ +H +IN
Sbjct: 56 KKNENIIYLKKTMRVTPSEEKIHEMIN 82
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -1
Query: 248 HKGSRFL*MSSTKVIPSADISCILQQAETMR 156
HK ++F+ S + + +AD + +LQ+ E +R
Sbjct: 104 HKAAKFVSEKSLEKVSTADNNLVLQELENLR 134
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,382,646
Number of Sequences: 5004
Number of extensions: 68583
Number of successful extensions: 183
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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