Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_J09
(845 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 97 1e-20
02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 75 5e-14
06_01_0256 - 1905767-1905901,1906375-1906407,1906489-1906585,190... 74 2e-13
03_05_0348 - 23346182-23348022,23348118-23348148 69 5e-12
02_03_0030 - 14083117-14083166,14083620-14083689,14083777-140838... 63 2e-10
04_01_0622 - 8175226-8175312,8175674-8175763,8176370-8176457,817... 37 0.018
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 32 0.50
06_01_0255 - 1900508-1900549,1900728-1900817,1900902-1900995,190... 32 0.66
02_05_0978 - 33242938-33242988,33243729-33243911,33244458-332445... 29 4.7
09_06_0191 + 21446357-21446776 29 6.2
07_03_0060 + 12927697-12927830,12928042-12928315 29 6.2
01_01_0203 - 1756812-1757032,1757646-1757730 28 8.1
>04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,
9992466-9992555,9992692-9992782,9993530-9993729,
9998024-9998101,9998196-9998312,10000017-10000112,
10000192-10000317,10000533-10000629,10000979-10001023,
10002106-10002179,10002267-10002350,10002439-10002522,
10002660-10002851,10003775-10003903,10004061-10004093,
10004190-10004286,10004833-10004883,10005211-10005289,
10005480-10005552,10005595-10005691,10006392-10006473,
10008345-10008691,10010271-10010535,10010624-10010743,
10010971-10011358
Length = 1219
Score = 97.5 bits (232), Expect = 1e-20
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 15/228 (6%)
Frame = +1
Query: 196 AEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACP 375
A ++VED++ +R+PL MD IY I P+++++ ++D + G +Y+ A+VFF+
Sbjct: 453 ASSDSVVEDLYMRRQPLPLMDAIYFIQPTKENIRIFMSDMS-GKIPLYKKAYVFFSSPVQ 511
Query: 376 DILFNELSR-SQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMY--NPALAQTRNAN 546
L ++ + S + I L E+N+ + + Q F+ D + + ++ N + N+
Sbjct: 512 RELVAQIKKDSNVRARIGALSEMNLEYFAIDSQGFTTDHDKALEELFSENAEGSLKYNSC 571
Query: 547 MERIAEQIATLCATLGEYPSVRYRS----DWERNVELAQLIQQKLDA--------YKADE 690
+ +A +IAT+ A++ E+P V YR D L L KL A +KA
Sbjct: 572 LNMMATRIATVFASMREFPRVHYRVARTIDASTLTTLRDLAPTKLAAGVWNCLARFKAMI 631
Query: 691 PTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIENDVY 834
P E P LL++DR D ++P++HE T AM +DLL ++ + Y
Sbjct: 632 P---EFPQTETCELLIVDRSIDQIAPIIHEWTYDAMCHDLLCMDGNKY 676
>02_03_0084 -
15041261-15041437,15041625-15041765,15042857-15042946,
15043111-15043201,15043953-15044155,15045361-15045438,
15045535-15045651,15046111-15046161,15046405-15046500,
15046726-15046742,15046938-15047064,15050585-15050681,
15051565-15051638,15051910-15051993,15052099-15052290,
15054191-15054319,15055607-15055639,15055747-15055843,
15055940-15055990,15057494-15057564,15058305-15058455,
15058625-15058703,15059265-15059346,15060335-15060335,
15060565-15060620,15060969-15061018,15061511-15061580
Length = 834
Score = 75.4 bits (177), Expect = 5e-14
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Frame = +1
Query: 286 KSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNELSR-SQIAKYIKTLKEINIAFIPY 462
+ + +ND + G +Y+ A+VFF+ L ++ + S + I L E+N+ +
Sbjct: 186 RCIGMFLNDMS-GRNPLYKKAYVFFSSPIQKELVTQIKKDSSVLPRIGALSEMNLEYFAI 244
Query: 463 EQQVFSLDSPETFQCMY--NPALAQTRNANMERIAEQIATLCATLGEYPSVRYRS----D 624
+ Q F+ D + ++ N + NA + +A +I+T+ A++ E+P V YR D
Sbjct: 245 DSQGFTTDHERALEELFSENALDSHKYNACLNTMATRISTVFASMREFPRVHYRVAKTID 304
Query: 625 WERNVELAQLIQQKLDAYKAD-----EPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTL 789
L L+ KL A + + ++ + P LL++DR D ++P++HE T
Sbjct: 305 ASVTTTLRDLVPTKLAAAVWNCLSKLKTSIPDYPQTETCELLIVDRSVDQIAPIIHEWTY 364
Query: 790 QAMAYDLLPIENDVYXYD 843
AM +DLL ++ + Y ++
Sbjct: 365 DAMCHDLLCMDGNKYVHE 382
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/56 (50%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = +1
Query: 130 VLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPS-EKSV 294
VLI+ +L+++++S CKM DI+ EG++LVED++K+R+PL ++D IY I P+ EK+V
Sbjct: 60 VLIMDKLTVKIISCSCKMADITEEGVSLVEDLYKRRQPLPSLDAIYFIQPTKEKNV 115
>06_01_0256 -
1905767-1905901,1906375-1906407,1906489-1906585,
1907080-1907158,1907373-1907454,1907649-1907707,
1907821-1907893
Length = 185
Score = 73.7 bits (173), Expect = 2e-13
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Frame = +1
Query: 97 KGKESAIIAWSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLIT 276
K KE+ +W VLI+ + ++R+++ CKM +I+ GI+LVED+ K+REP+ +MD IY +
Sbjct: 35 KDKETKS-SWKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQ 93
Query: 277 PSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNELSR-SQIAKYIKTLKEINIAF 453
P ++ A++FF+ P L + + S + I L+E+N+ F
Sbjct: 94 PLKEK------------------AYIFFSSPIPKELVSYIKNDSSVIPRIGALREMNLEF 135
Query: 454 IPYEQQVFSLDSPETFQCMYNPALAQTR-NANMERIAEQIATLCATL 591
+ Q F+ D F +Y+ + N + +A +IAT A+L
Sbjct: 136 FAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATTFASL 182
>03_05_0348 - 23346182-23348022,23348118-23348148
Length = 623
Score = 68.9 bits (161), Expect = 5e-12
Identities = 55/246 (22%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Frame = +1
Query: 121 AWSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHA 300
A+ +L++ + +++ ++ ++ G+TL +I K R+ + +YL+ P+ +V
Sbjct: 42 AYKILVMDSPCVALLAPVLRVGELRRHGVTLHLNIDKARQQVPDAPAVYLLRPTAANVDR 101
Query: 301 LINDFAVGNRIMYRAAHVFFTEACPDILFNEL----SRSQIAKYIKTLKEINIAFIPYEQ 468
+ D A G +Y + H+ F+ P L L + S+ A + + + + F+ E+
Sbjct: 102 VAADAAAG---LYASFHLNFSTCVPRALLERLASATAASRSAHRVARVADQYLDFVCLEE 158
Query: 469 QVFSLDSPETFQCMYNPALAQTR-NANMERIAEQIATLCATLGEYPSVRYRSDWERNVEL 645
+FSL P + + +PA A+ A ++ IA + + ATLG P +R +
Sbjct: 159 GLFSLAQPRAYVALNDPAAAEADITALVDAIALGLFCVVATLGAVPVIRCAGGGPAEMVA 218
Query: 646 AQLIQQKLDAYKADEPTMGEGPXKA-----RSXLLVLDRGFDCVSPLLHELTLQAMAYDL 810
A L + D A E A R L + DR F+ + H+ + + + +D+
Sbjct: 219 AALDARLRDHLIAKPNLFTEAASTAVASFQRPLLCLFDRNFELSVGIQHDWSYRPLVHDV 278
Query: 811 LPIEND 828
L ++++
Sbjct: 279 LGLKSN 284
>02_03_0030 -
14083117-14083166,14083620-14083689,14083777-14083857,
14083940-14084065,14084916-14085143,14085246-14085325,
14086567-14086768,14086857-14086946
Length = 308
Score = 63.3 bits (147), Expect = 2e-10
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Frame = +1
Query: 130 VLIVAQLSMRMVSACCKMHDISAEGITLVEDIHK---KREPLCTMDGIYLITPSEKSVHA 300
VL++ ++ MVS D+ + + LVE + RE + + +Y + PS +V
Sbjct: 23 VLVLDPDTVGMVSVVYSQSDLLRKEVFLVETVDNASSSRESMAHLKAVYFLRPSSDNVQK 82
Query: 301 LINDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAFIPYEQQVFS 480
L A Y H+FF+ L+ S + ++ ++E F + F+
Sbjct: 83 LRRHLAAPRFAEY---HLFFSNVLKIPQIQVLADSDEQEVVQQVQEFYADFCAIDPYHFT 139
Query: 481 LDSPETFQCMYNPALAQTRNANM-ERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLI 657
L+ M + + +R + IA++ L P +RY +R ++A+ I
Sbjct: 140 LNIRNNHVYMLPMVVDPPGMQSFCDRAVDGIASVFLALKRRPVIRY----QRTSDVAKRI 195
Query: 658 QQKLDA--YKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIEND 828
Q+ Y+ + + S LLV+DR D V+PLL++ T QAM ++L+ IEN+
Sbjct: 196 AQETARLMYEQESGLFDFRRTENSSLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIENN 254
>04_01_0622 -
8175226-8175312,8175674-8175763,8176370-8176457,
8177021-8177095,8177754-8177821,8177898-8177955,
8178862-8178942,8179968-8180038,8180144-8180225,
8182327-8182449,8183023-8183129,8183201-8183263,
8183877-8183936,8184100-8184151,8185566-8185598,
8185820-8185871,8185965-8186028,8186693-8186749,
8186962-8187006,8187083-8187190,8188147-8188212,
8188382-8188492,8190841-8191035,8191419-8191499,
8191591-8191630,8191764-8191816
Length = 669
Score = 37.1 bits (82), Expect = 0.018
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Frame = +1
Query: 361 TEACPDILFNELSRSQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRN 540
T AC IL E ++ TL E + +P ++ V + + Q L +
Sbjct: 118 TVACEKILEEEKVHQKL-----TLGEYPLYLVPLDEDVICFELDHSLQ----ECLIEGDT 168
Query: 541 ANMERIAEQIATLCATLGEYPSVRYRSDWE-RNVELAQLIQQKLDAYKADEPTMGEGPXK 717
+++ +A+ I L G P+VR + + EL +QQ+ D D+ MG
Sbjct: 169 SSVWHVAKAIHKLEFAFGVIPNVRAKGVASTKAAELLNSMQQE-DPVNMDD--MGTPEIN 225
Query: 718 ARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIEN 825
+++LDR D V+P+ +LT + + ++L I N
Sbjct: 226 T---VILLDREVDLVTPMCSQLTYEGLLDEMLQINN 258
>04_03_0927 +
20871487-20871903,20872667-20872812,20873204-20873301,
20873378-20873572,20873670-20873797,20873892-20874050,
20875119-20875223,20875449-20875559,20875653-20875790,
20875909-20876091,20876362-20876517,20876615-20876738,
20876820-20877030,20877614-20877729,20877828-20878053,
20878218-20878311,20879198-20879275,20879822-20879971,
20880086-20880292,20880584-20880788,20880990-20881096
Length = 1117
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 188 IYLLKELPWLRTFTRNVNLYAPWMVFTSLLRLRNQCML*SMTL 316
+Y+L+ W+R T+ ++ Y W T+L R ++ + SM L
Sbjct: 667 LYILRLCSWMRATTKEISKYETWFTLTTLERNKSLYAISSMPL 709
>06_01_0255 -
1900508-1900549,1900728-1900817,1900902-1900995,
1901119-1901315,1901838-1901957,1902559-1902654,
1902744-1902869,1903125-1903221,1904476-1904546,
1904629-1904724,1904803-1904955,1904993-1905136
Length = 441
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 760 VSPLLHELTLQAMAYDLLPIENDVYXYD 843
++P++HE T AM +DLL ++ Y Y+
Sbjct: 72 IAPVIHEWTYDAMCHDLLEMDGQKYIYE 99
>02_05_0978 -
33242938-33242988,33243729-33243911,33244458-33244520,
33244656-33246083
Length = 574
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 323 VTASCTELLMFSSLKLVLIFCLMSYPVAK*PNILK-H*RKSTLLSFHMNSRYFHW-IHLK 496
+TASCT+ + S+ L+ C+ A IL +K+ L H ++ HW L
Sbjct: 491 LTASCTQAIPSLSVNSCLVICICKLKFANHAGILNCKMKKALALMEHSHTNRGHWSAGLS 550
Query: 497 HSNACTTQL*HR 532
+S+ T++ +R
Sbjct: 551 NSSKGLTKVLYR 562
>09_06_0191 + 21446357-21446776
Length = 139
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 85 YRGPKGKESAIIAWSVLIVAQLSMRMVSACCK 180
YRG KG ++AW ++I+ + S+ V C+
Sbjct: 84 YRGTKGLMLTLLAWGLVILVETSVLAVIDACE 115
>07_03_0060 + 12927697-12927830,12928042-12928315
Length = 135
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 21 SPVQNGSESTCRXKXXAXSXPLSRTQRQGISYHRMERFNSSPT 149
S V++GS+STCR S + + RQ S +M +S P+
Sbjct: 51 STVESGSDSTCRRSSWVISTSRTTSLRQKESLSKMRSRSSLPS 93
>01_01_0203 - 1756812-1757032,1757646-1757730
Length = 101
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 172 CCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 288
CC + S G+ ED+ KK +P+C + P +K
Sbjct: 46 CCSNCNFSFSGLYTCEDVVKKCDPVCKSCAVVKTHPVKK 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,862,104
Number of Sequences: 37544
Number of extensions: 433674
Number of successful extensions: 993
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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