Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_J09
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated ... 348 3e-96
S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein. 348 3e-96
U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated p... 340 9e-94
S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein. 340 9e-94
AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical ... 178 3e-45
U49829-11|AAP40539.1| 93|Caenorhabditis elegans Uncoordinated ... 95 7e-20
Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical pr... 62 4e-10
M77697-6|AAA27901.2| 603|Caenorhabditis elegans Hypothetical pr... 38 0.012
U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine rece... 33 0.34
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 32 0.59
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 4.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 4.2
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF125971-3|AAN73292.1| 152|Caenorhabditis elegans Hypothetical ... 29 5.5
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 29 5.5
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 28 9.6
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 28 9.6
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 28 9.6
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 28 9.6
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 28 9.6
U23182-2|ABD94105.1| 441|Caenorhabditis elegans Hypothetical pr... 28 9.6
U23182-1|ABD94104.1| 468|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 28 9.6
>U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated
protein 18, isoform a protein.
Length = 591
Score = 348 bits (856), Expect = 3e-96
Identities = 167/270 (61%), Positives = 210/270 (77%)
Frame = +1
Query: 34 MALKALVGQXLXHXVXRYRGPKGKESAIIAWSVLIVAQLSMRMVSACCKMHDISAEGITL 213
M+LK +VG L + V R P K AW+VLIV L+MRM+S+CCKMH+I EGIT+
Sbjct: 1 MSLKQIVGHKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITI 57
Query: 214 VEDIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNE 393
VED++K+REPL T++ IYLI P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+
Sbjct: 58 VEDLNKRREPLPTLEAIYLIAPTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFST 115
Query: 394 LSRSQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIA 573
LS+S A++IKTLKEINIAF PYE QVF+LDSP+TF YN +N+ERIAEQIA
Sbjct: 116 LSKSAAARFIKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIA 175
Query: 574 TLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGF 753
T+CATLGEYPS+RYR+D+ERNVEL L++QKLDAYKAD+P+MGEG KARS L+++DRG+
Sbjct: 176 TVCATLGEYPSLRYRADFERNVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGY 235
Query: 754 DCVSPLLHELTLQAMAYDLLPIENDVYXYD 843
D ++PLLHELTLQAM YDLL IENDVY Y+
Sbjct: 236 DAITPLLHELTLQAMCYDLLGIENDVYKYE 265
>S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein.
Length = 591
Score = 348 bits (856), Expect = 3e-96
Identities = 167/270 (61%), Positives = 210/270 (77%)
Frame = +1
Query: 34 MALKALVGQXLXHXVXRYRGPKGKESAIIAWSVLIVAQLSMRMVSACCKMHDISAEGITL 213
M+LK +VG L + V R P K AW+VLIV L+MRM+S+CCKMH+I EGIT+
Sbjct: 1 MSLKQIVGHKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITI 57
Query: 214 VEDIHKKREPLCTMDGIYLITPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNE 393
VED++K+REPL T++ IYLI P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+
Sbjct: 58 VEDLNKRREPLPTLEAIYLIAPTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFST 115
Query: 394 LSRSQIAKYIKTLKEINIAFIPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIA 573
LS+S A++IKTLKEINIAF PYE QVF+LDSP+TF YN +N+ERIAEQIA
Sbjct: 116 LSKSAAARFIKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIA 175
Query: 574 TLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGF 753
T+CATLGEYPS+RYR+D+ERNVEL L++QKLDAYKAD+P+MGEG KARS L+++DRG+
Sbjct: 176 TVCATLGEYPSLRYRADFERNVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGY 235
Query: 754 DCVSPLLHELTLQAMAYDLLPIENDVYXYD 843
D ++PLLHELTLQAM YDLL IENDVY Y+
Sbjct: 236 DAITPLLHELTLQAMCYDLLGIENDVYKYE 265
>U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated
protein 18, isoform c protein.
Length = 673
Score = 340 bits (835), Expect = 9e-94
Identities = 159/250 (63%), Positives = 199/250 (79%)
Frame = +1
Query: 94 PKGKESAIIAWSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLI 273
P K AW+VLIV L+MRM+S+CCKMH+I EGIT+VED++K+REPL T++ IYLI
Sbjct: 100 PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRREPLPTLEAIYLI 159
Query: 274 TPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAF 453
P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+ LS+S A++IKTLKEINIAF
Sbjct: 160 APTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFSTLSKSAAARFIKTLKEINIAF 217
Query: 454 IPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWER 633
PYE QVF+LDSP+TF YN +N+ERIAEQIAT+CATLGEYPS+RYR+D+ER
Sbjct: 218 TPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIATVCATLGEYPSLRYRADFER 277
Query: 634 NVELAQLIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLL 813
NVEL L++QKLDAYKAD+P+MGEG KARS L+++DRG+D ++PLLHELTLQAM YDLL
Sbjct: 278 NVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGYDAITPLLHELTLQAMCYDLL 337
Query: 814 PIENDVYXYD 843
IENDVY Y+
Sbjct: 338 GIENDVYKYE 347
>S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein.
Length = 673
Score = 340 bits (835), Expect = 9e-94
Identities = 159/250 (63%), Positives = 199/250 (79%)
Frame = +1
Query: 94 PKGKESAIIAWSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLI 273
P K AW+VLIV L+MRM+S+CCKMH+I EGIT+VED++K+REPL T++ IYLI
Sbjct: 100 PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRREPLPTLEAIYLI 159
Query: 274 TPSEKSVHALINDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAF 453
P+ +S+ LI D+ N +Y+ AHVFFTEAC D LF+ LS+S A++IKTLKEINIAF
Sbjct: 160 APTAESIDKLIQDYCARN--LYKCAHVFFTEACSDQLFSTLSKSAAARFIKTLKEINIAF 217
Query: 454 IPYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWER 633
PYE QVF+LDSP+TF YN +N+ERIAEQIAT+CATLGEYPS+RYR+D+ER
Sbjct: 218 TPYESQVFNLDSPDTFFLYYNAQKQGGLTSNLERIAEQIATVCATLGEYPSLRYRADFER 277
Query: 634 NVELAQLIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLL 813
NVEL L++QKLDAYKAD+P+MGEG KARS L+++DRG+D ++PLLHELTLQAM YDLL
Sbjct: 278 NVELGHLVEQKLDAYKADDPSMGEGADKARSQLIIIDRGYDAITPLLHELTLQAMCYDLL 337
Query: 814 PIENDVYXYD 843
IENDVY Y+
Sbjct: 338 GIENDVYKYE 347
>AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical
protein T07A9.10 protein.
Length = 562
Score = 178 bits (434), Expect = 3e-45
Identities = 97/243 (39%), Positives = 154/243 (63%), Gaps = 4/243 (1%)
Frame = +1
Query: 124 WSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 303
+SVL++ + +M +V++C ++++ EG+TLVED+ + REP+ +MD IY+I+P +S+ L
Sbjct: 29 FSVLVLDKSAMVVVNSCLSLNEVFEEGVTLVEDLTRNREPMPSMDAIYIISPVAESIDIL 88
Query: 304 INDFAVGNRI----MYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAFIPYEQQ 471
INDF+ + YR+AH+FF + C D LF +LS+S K+IKTLKE+N+ P E Q
Sbjct: 89 INDFSRKTKFNPGNSYRSAHIFFLDPCCDELFEKLSKSPAVKWIKTLKELNLNLKPVESQ 148
Query: 472 VFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQ 651
+F+++S Q R +M + A+ I +LCATL +P++R++SD+ ++ E+ Q
Sbjct: 149 IFTVNS-------------QFR-GDMTKTADGIVSLCATLNIHPTLRFQSDFAQSSEICQ 194
Query: 652 LIQQKLDAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELTLQAMAYDLLPIENDV 831
++QKL + G + L+VLDR FD VSPLLHE+TLQAM D+ ++ V
Sbjct: 195 RVEQKLKEF-------GNEGMGTDAELVVLDRSFDLVSPLLHEVTLQAMVVDVTAFKDGV 247
Query: 832 YXY 840
Y Y
Sbjct: 248 YRY 250
>U49829-11|AAP40539.1| 93|Caenorhabditis elegans Uncoordinated
protein 18, isoform b protein.
Length = 93
Score = 94.7 bits (225), Expect = 7e-20
Identities = 47/87 (54%), Positives = 63/87 (72%)
Frame = +1
Query: 34 MALKALVGQXLXHXVXRYRGPKGKESAIIAWSVLIVAQLSMRMVSACCKMHDISAEGITL 213
M+LK +VG L + V R P K AW+VLIV L+MRM+S+CCKMH+I EGIT+
Sbjct: 1 MSLKQIVGHKLLNDVIR---PLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITI 57
Query: 214 VEDIHKKREPLCTMDGIYLITPSEKSV 294
VED++K+REPL T++ IYLI P+ +SV
Sbjct: 58 VEDLNKRREPLPTLEAIYLIAPTAESV 84
>Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical
protein F43D9.3b protein.
Length = 689
Score = 62.5 bits (145), Expect = 4e-10
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Frame = +1
Query: 124 WSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 303
W VL++ + ++S + + G+TL I +REPL + +Y ++P+++++ +
Sbjct: 64 WKVLVLDRTGQDIISPLLPVKQLRELGVTLHLLIGARREPLTDVPAVYFVSPNDENIDLM 123
Query: 304 INDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQI----AKYIKTLKEINIAFIPYEQQ 471
D + MY + + F L+ + + ++ + + + FI E
Sbjct: 124 SEDL---KKAMYDSFYCNFISPLARPRLESLASAAVHGGAVSQVQKVVDQYLNFISLEDD 180
Query: 472 VFSL-----DSPETFQCMYNPALAQTR-NANMERIAEQIATLCATLGEYPSVRYRSDWER 633
+F L +S ++ M +P + NA ++ IA+ + +CAT+G P +R
Sbjct: 181 LFVLRRYSENSTFSYHAMNSPGTSDVAVNAMLDSIADGLFAVCATMGIVPIIRCPKGNAA 240
Query: 634 NVELAQLIQQKL---------DAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELT 786
+ +A+ + QKL + + D MG +R L++ DR D + L H T
Sbjct: 241 EM-VAKKLDQKLRDNLRDSRNNLFTMDGVRMGL-LQTSRPLLVIGDRSADLATMLHHTWT 298
Query: 787 LQAMAYDLLPIEND 828
QA+ +D+L ++ +
Sbjct: 299 YQALMHDVLELDQN 312
>Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical
protein F43D9.3a protein.
Length = 707
Score = 62.5 bits (145), Expect = 4e-10
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Frame = +1
Query: 124 WSVLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL 303
W VL++ + ++S + + G+TL I +REPL + +Y ++P+++++ +
Sbjct: 64 WKVLVLDRTGQDIISPLLPVKQLRELGVTLHLLIGARREPLTDVPAVYFVSPNDENIDLM 123
Query: 304 INDFAVGNRIMYRAAHVFFTEACPDILFNELSRSQI----AKYIKTLKEINIAFIPYEQQ 471
D + MY + + F L+ + + ++ + + + FI E
Sbjct: 124 SEDL---KKAMYDSFYCNFISPLARPRLESLASAAVHGGAVSQVQKVVDQYLNFISLEDD 180
Query: 472 VFSL-----DSPETFQCMYNPALAQTR-NANMERIAEQIATLCATLGEYPSVRYRSDWER 633
+F L +S ++ M +P + NA ++ IA+ + +CAT+G P +R
Sbjct: 181 LFVLRRYSENSTFSYHAMNSPGTSDVAVNAMLDSIADGLFAVCATMGIVPIIRCPKGNAA 240
Query: 634 NVELAQLIQQKL---------DAYKADEPTMGEGPXKARSXLLVLDRGFDCVSPLLHELT 786
+ +A+ + QKL + + D MG +R L++ DR D + L H T
Sbjct: 241 EM-VAKKLDQKLRDNLRDSRNNLFTMDGVRMGL-LQTSRPLLVIGDRSADLATMLHHTWT 298
Query: 787 LQAMAYDLLPIEND 828
QA+ +D+L ++ +
Sbjct: 299 YQALMHDVLELDQN 312
>M77697-6|AAA27901.2| 603|Caenorhabditis elegans Hypothetical
protein B0303.9 protein.
Length = 603
Score = 37.5 bits (83), Expect = 0.012
Identities = 43/223 (19%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Frame = +1
Query: 190 ISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVHAL---INDFAVGNRIMYRAAHVFF 360
++A G+ I K+ T ++ + P+ S+ L I++ ++I+Y+ VFF
Sbjct: 67 LAAHGVVANHSIETKKSA-STPHVVFFLAPTMVSLDLLCDYIDNVRNDSKILYQ---VFF 122
Query: 361 TEACPDILFNELSRSQIAKY---IKTLKEINIAFIPYEQQVFSLDSPE-TFQCMYNPALA 528
++ L KY ++++KEI + ++P + + SL SP+ + + N
Sbjct: 123 IPEAWFVVRESLKTRAEGKYWERLESVKEIPLCWLPRDGECLSLSSPQIAARLLINGDWT 182
Query: 529 QTRN--ANMERIAEQIATLCATLGEYP-SVRYRSDWERNVELAQLIQQKLDAYKADEPTM 699
+ ++ + ++ + P S+ + W +V A+++ + ++ +AD T
Sbjct: 183 HLHKCAVALNQLIDMCRGRSSSSNQRPMSIYAKGKWASDV--AKMMGKIRNSAEADSMTK 240
Query: 700 GEGPXKAR---SXLLVLDRGFDCVSPLLHELTLQAMAYDLLPI 819
P + + ++++DR D ++P+L +LT + ++ I
Sbjct: 241 NLDPIEGLLKINRIVLIDRWMDPLTPMLSQLTFYGLLDEIYGI 283
>U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 3 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.34
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 176 AKCMIYLLKELPWL--RTFTRNVNLYAPWMV--FTSLLRLRNQCML*SMTLL--SVTASC 337
A C+ Y + + W+ R F RN + Y + V FTS+L + N+ + L + S
Sbjct: 29 AICINYRILYVIWVSQRHFYRNQSFYNLYSVDCFTSVLAMSNELIFTRSFLYFPQLCVSF 88
Query: 338 TELLMFSSLKLVLIFCLMSYPVAK*PNI 421
+E++ S + + + +CL+SY +A P I
Sbjct: 89 SEIVKNSPVFMRIYYCLLSYLIAIKPVI 116
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
protein B0207.5 protein.
Length = 3279
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 304 INDFAVGNRIMY-RAAHVFFT-EACPDILFNELSRSQIAKYIK 426
+N+ + + Y R + +T ++C DI+ NELSR + KY+K
Sbjct: 636 VNELSEQEYLQYKRRCRIDYTHKSCKDIVLNELSREEYKKYLK 678
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +1
Query: 283 EKSVHALINDFAVGNRIMYRAAHVF-FTEACPD-ILFNELSRSQIAKYIKTLKEINIAFI 456
E+ + I + + Y V+ FT + D FN L S K I K ++ I
Sbjct: 128 EEKLSEAIKQWCIEVMKSYEEIDVYDFTSSFRDGHAFNYLIHSYDRKLINLTKTAEMSAI 187
Query: 457 PYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERN 636
+ F++ + +T+ P L ++ + +++ + + LC + Y ++ S E
Sbjct: 188 DRIENAFAV-AEKTWNV---PRLLNPKDLHSDQL-DSHSVLCYLMSLYLAMISTSKIETE 242
Query: 637 VELAQLIQQKLDAYKADEPTMGEGPXKARSXLL 735
+E Q+ QQK+ A A + P + S L
Sbjct: 243 LEAQQIQQQKVAALLASHKMLSSQPSTSSSSAL 275
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +1
Query: 283 EKSVHALINDFAVGNRIMYRAAHVF-FTEACPD-ILFNELSRSQIAKYIKTLKEINIAFI 456
E+ + I + + Y V+ FT + D FN L S K I K ++ I
Sbjct: 128 EEKLSEAIKQWCIEVMKSYEEIDVYDFTSSFRDGHAFNYLIHSYDRKLINLTKTAEMSAI 187
Query: 457 PYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERN 636
+ F++ + +T+ P L ++ + +++ + + LC + Y ++ S E
Sbjct: 188 DRIENAFAV-AEKTWNV---PRLLNPKDLHSDQL-DSHSVLCYLMSLYLAMISTSKIETE 242
Query: 637 VELAQLIQQKLDAYKADEPTMGEGPXKARSXLL 735
+E Q+ QQK+ A A + P + S L
Sbjct: 243 LEAQQIQQQKVAALLASHKMLSSQPSTSSSSAL 275
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +1
Query: 283 EKSVHALINDFAVGNRIMYRAAHVF-FTEACPD-ILFNELSRSQIAKYIKTLKEINIAFI 456
E+ + I + + Y V+ FT + D FN L S K I K ++ I
Sbjct: 128 EEKLSEAIKQWCIEVMKSYEEIDVYDFTSSFRDGHAFNYLIHSYDRKLINLTKTAEMSAI 187
Query: 457 PYEQQVFSLDSPETFQCMYNPALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERN 636
+ F++ + +T+ P L ++ + +++ + + LC + Y ++ S E
Sbjct: 188 DRIENAFAV-AEKTWNV---PRLLNPKDLHSDQL-DSHSVLCYLMSLYLAMISTSKIETE 242
Query: 637 VELAQLIQQKLDAYKADEPTMGEGPXKARSXLL 735
+E Q+ QQK+ A A + P + S L
Sbjct: 243 LEAQQIQQQKVAALLASHKMLSSQPSTSSSSAL 275
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 658 GLVELTQHCVPNHCGIERKDIRRAWHRGSRFVQQ 557
G V L +HC+ + R +++ HRGS F+ Q
Sbjct: 797 GTVALLRHCLQQNTDEARMNLQFVLHRGSTFLSQ 830
>AF125971-3|AAN73292.1| 152|Caenorhabditis elegans Hypothetical
protein Y4C6B.4b protein.
Length = 152
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 130 VLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 288
++IV M +VS C I+ I + +D+ + E T+ IY TP+EK
Sbjct: 11 IIIVLLSFMCLVSVCSNYIIINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEK 63
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 130 VLIVAQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 288
++IV M +VS C I+ I + +D+ + E T+ IY TP+EK
Sbjct: 11 IIIVLLSFMCLVSVCSNYIIINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEK 63
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical protein
F42E11.1 protein.
Length = 1266
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 37 ALKALVGQXLXHXVXRYRGPKGKESAIIAWSVLIVAQLSMRMVSACCK 180
AL ++ Q +YRGPK ESAI A ++ + + + V A K
Sbjct: 858 ALLLVIAQSAVAQYLKYRGPKDMESAIEASRIVTESISNWKTVQALTK 905
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 375 RTSFSEENMSS-SVHDAVTDSKVIDQSMH*FLRRSN 271
+ F EEN+ + + HD + + +D+ M FL+ S+
Sbjct: 1027 KPKFVEENLQTQNTHDGIKEQSAVDEEMPLFLKNSD 1062
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 375 RTSFSEENMSS-SVHDAVTDSKVIDQSMH*FLRRSN 271
+ F EEN+ + + HD + + +D+ M FL+ S+
Sbjct: 1027 KPKFVEENLQTQNTHDGIKEQSAVDEEMPLFLKNSD 1062
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 375 RTSFSEENMSS-SVHDAVTDSKVIDQSMH*FLRRSN 271
+ F EEN+ + + HD + + +D+ M FL+ S+
Sbjct: 1027 KPKFVEENLQTQNTHDGIKEQSAVDEEMPLFLKNSD 1062
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 685 QPYKHQVSVGLVELTQHCVPNHCGI 611
QPY+ + S GL+ HC+ + G+
Sbjct: 148 QPYERRSSTGLIHCKSHCLNSQIGV 172
>U23182-2|ABD94105.1| 441|Caenorhabditis elegans Hypothetical
protein F40B5.2b protein.
Length = 441
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +1
Query: 211 LVEDIHKKREPLCTM---DGIYLITPSEKSVHALINDF 315
LV D H EPLC + G+Y T + + +H + ++
Sbjct: 252 LVRDFHGAAEPLCNLKAPGGVYFATGNHEYMHGNVTEW 289
>U23182-1|ABD94104.1| 468|Caenorhabditis elegans Hypothetical
protein F40B5.2a protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +1
Query: 211 LVEDIHKKREPLCTM---DGIYLITPSEKSVHALINDF 315
LV D H EPLC + G+Y T + + +H + ++
Sbjct: 279 LVRDFHGAAEPLCNLKAPGGVYFATGNHEYMHGNVTEW 316
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 15 DASPVQNGSESTCRXKXXAXSXPLSRTQRQGISYHRMERFNS--SPTVHAHGLSL 173
+A+ + +GS ST + P+ + +SYHR +N+ +P + G+ L
Sbjct: 238 EATALTDGSASTSNAAPPPSTVPIQQNPPLRLSYHRAVHYNAILAPNIPTIGIGL 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,640,029
Number of Sequences: 27780
Number of extensions: 379911
Number of successful extensions: 831
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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