Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_J02
(816 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces pombe... 90 4e-19
SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr 2|... 89 9e-19
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 46 8e-06
SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr 2... 44 2e-05
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 29 0.60
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 29 1.0
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 27 3.2
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 27 4.2
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 4.2
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 5.6
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 26 5.6
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 7.4
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 26 7.4
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 25 9.7
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 25 9.7
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 25 9.7
>SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 89.8 bits (213), Expect = 4e-19
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Frame = +1
Query: 325 SQADSLD-IETETDLRILGCEMIQTAGILLRLPQVAMATGQIYLQRFYYSKSFVRYP-ME 498
SQ ++ D E +L LG E IQ AG+LL L Q + I +R Y + R P ++
Sbjct: 13 SQLEAFDSFEYAEELCTLGSEWIQEAGVLLNLTQNCVIVCLILFRR-YCTLYPPRVPDLD 71
Query: 499 TMAMGSIYLASKVEEKPCRIRDVINVFHHIKQ------VRAQKTISPMLVDQNYIELKNQ 660
+ M + + SK E P ++D+ NV ++K+ A+ I+ L + +N+
Sbjct: 72 AIVMACVSIGSKTTETPASVQDICNVVVYLKERFKDTNFEARGFIAHDLYSEEMYSSRNR 131
Query: 661 VIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYXNDA 813
+ E +L+ L F H+ PHKL + YLQ LQ N++L+Q+ WN+ NDA
Sbjct: 132 LSNMELEVLRALNFDTHIVIPHKLAIHYLQTLQLIDNKKLLQITWNFLNDA 182
>SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 342
Score = 88.6 bits (210), Expect = 9e-19
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Frame = +1
Query: 319 TPSQADSLDIETETDLRILGCEMIQTAGILLRLPQVAMATGQIYLQRFYYSKSFVRYPME 498
TPS D + ++ E R GC I G+ L+LPQ A+AT IY RFY S Y
Sbjct: 28 TPSALDGIPLDQEEIQRSKGCNFIINVGLRLKLPQTALATANIYFHRFYLRFSLKNYHYY 87
Query: 499 TMAMGSIYLASKVEEKPCRIRDVINVFHHIKQVRAQKTISPMLVDQ---NYIELKNQVIK 669
+A I+LA+KVE+ ++RD++ I + + S +LVD+ Y ++ ++
Sbjct: 88 EVAATCIFLATKVEDSVRKLRDIV-----INCAKVAQKNSNVLVDEQTKEYWRWRDVILY 142
Query: 670 AERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYXNDA 813
E +L+ L F V+HP+ ++ +++ + ++ + ++AW Y ND+
Sbjct: 143 TEEVLLEALCFDFTVEHPYPYVLSFIKKFVAD-DKNVTKVAWTYINDS 189
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 45.6 bits (103), Expect = 8e-06
Identities = 35/153 (22%), Positives = 68/153 (44%)
Frame = +1
Query: 355 ETDLRILGCEMIQTAGILLRLPQVAMATGQIYLQRFYYSKSFVRYPMETMAMGSIYLASK 534
E +LR+ I T L+ P + RF P+ A + +ASK
Sbjct: 34 ENNLRMQAFAWISTLSKTLKFPVRTSGLAMLLYSRFQLFFPVNEIPLLECATACLVVASK 93
Query: 535 VEEKPCRIRDVINVFHHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHV 714
+E+ + RD++ + H++++ + VD + + +++ ER L+ + F V
Sbjct: 94 IEDTAKKFRDIL-LAHYLQKHPGSE------VDAH---SQKRILGLERMTLELICFDFRV 143
Query: 715 KHPHKLIVVYLQLLQYEKNRQLMQMAWNYXNDA 813
+HPH +V + + L++ + +AWN DA
Sbjct: 144 RHPHNYMVKFAKSLKFSSS--TASIAWNVCTDA 174
>SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr
2|||Manual
Length = 228
Score = 44.4 bits (100), Expect = 2e-05
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 382 EMIQTAGILLRLPQVAMATGQIYLQRFYYSKSFVR-YPMETMAMGSIYLASKVEEKPCRI 558
+++QT G LRL Q +AT + L+R+ K+ + + +E + IYL+ KVEE P I
Sbjct: 37 KVVQTFGDRLRLRQRVLATAIVLLRRYMLKKNEEKGFSLEALVATCIYLSCKVEECPVHI 96
Query: 559 RDVIN 573
R + N
Sbjct: 97 RTICN 101
>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 432
Score = 29.5 bits (63), Expect = 0.60
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +1
Query: 514 SIYLASKVEEKPCRIRDVINV---FHHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRI 684
S+ A K+ K I D + +++ + R +KT S ++ + + KN ++
Sbjct: 33 SVSNARKLVRKRLLIADALKFKEQVNNLNEFRNKKTKSSLIRNDGFKLAKNVSSLLQKES 92
Query: 685 LKELGFCVHVKHPHKLIVVYLQLLQYEKNRQLMQMAWNYXND 810
L++ ++ + K V Y +LQY + AW+ ND
Sbjct: 93 LEKALHLLYERSNAKKTVAYNLVLQYHLAKGHYNAAWSLYND 134
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 529 TLSICYPLP*FPWDIVQMISSSKTFVDKSDQSP 431
+L +C +PWDIV S K F DK + P
Sbjct: 268 SLLMCSTRSVYPWDIVITHQSGKLFFDKREGGP 300
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 580 HHIKQVRAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVY 744
H +R IS V+ + + ++ I RI K+ + HP KL VVY
Sbjct: 76 HDAADIREMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVY 130
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 26.6 bits (56), Expect = 4.2
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +1
Query: 184 TTTVQNQPKSNNSQHNTPPAKLQKTYGKIVLTLYNCLLPESVFKETPSQADSLDIETETD 363
T + +Q S N Q+ T KLQ+T +++L + PE+V + Q ET T
Sbjct: 87 TDPLLSQLNSLNIQNATEDEKLQETSIRLLLYIVQRKFPEAVDLDWSPQGIPW-TETSTG 145
Query: 364 LRILGCEMIQTAGILLRLPQVAMATGQIYLQ 456
+ IL A +L L Q A A ++ Q
Sbjct: 146 ICIL------QATVLSSLAQYAQANDEVAYQ 170
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 399 SCLYHFATQDPKICLSFDVKAISL 328
SCL + TQD K + DVK SL
Sbjct: 366 SCLQYRLTQDEKYLIDLDVKVCSL 389
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 316 ETPSQADSLDIETETDLRILGCEMIQTAGILLRLPQVAMATGQIYL 453
E P + +I ET +RIL C ++ + +L + Q+ L
Sbjct: 483 ENPEKRKYFEINIETPVRILSCRCVKDSTLLPPYESSSQGDNQVLL 528
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 586 IKQVRAQKTISPMLVDQNYIELKNQVIK---AERRILKELGFCVHVKH 720
I+ R + +S +++D +Y+E+KN I R+ K GF H
Sbjct: 42 IQSARVSQALSHIILDTSYLEIKNVTINDIPTPFRVDKRRGFLGSALH 89
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 625 LVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVV-YLQLLQYEKNRQLMQMAWN 798
+ D YI++ Q + R+ K+ G C+ ++H L + Y R + +A N
Sbjct: 471 MFDMQYIDIAEQALGVLERLSKDFGICI-LEHRGMLAALQYFDFFYTTVQRTAISLAAN 528
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 543 ETMQNKRCNQRVSPHQTGQSTENNK 617
+ ++NK ++V H T STE+NK
Sbjct: 83 QILENKSSIEKVHSHLTNNSTESNK 107
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 544 KPCRIRDVINVFHHIKQVRAQ-KTISPMLVDQNYIELKNQVIKAERRILKELGFC 705
K + R + F +RAQ K IS + + I ++ + +K +R+L+ LGFC
Sbjct: 798 KDSKHRAEYHEFRKKLNLRAQIKDISTKITNTEAI-IQLRELKIRQRVLRRLGFC 851
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 145 LLQRLV*RENKMTTTTVQNQPKSNNSQHNTP 237
+L+ +V NK T+ Q+QP S N + N P
Sbjct: 379 VLKLVVTHPNKKNTSVSQSQPASPNLRFNMP 409
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 274 LTLYNCLLPESVFKETPSQADSLDIETETDLRI 372
L +YN + + + TP+QA L++ + D RI
Sbjct: 191 LEIYNETIRDLLVSPTPNQAKPLNLREDADRRI 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,535,883
Number of Sequences: 5004
Number of extensions: 75069
Number of successful extensions: 223
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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