Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_J02
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.         300   3e-83
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.         191   3e-50
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   2.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.5  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score =  300 bits (737), Expect = 3e-83
 Identities = 140/192 (72%), Positives = 164/192 (85%)
 Frame = +1

Query: 238 PAKLQKTYGKIVLTLYNCLLPESVFKETPSQADSLDIETETDLRILGCEMIQTAGILLRL 417
           P  +Q+ YGKIVLTL NCLLPE    +TPSQ D LD ETETDLRILGCE+IQTAGILL+L
Sbjct: 35  PQPVQRPYGKIVLTLENCLLPEVKLDQTPSQNDGLDRETETDLRILGCELIQTAGILLKL 94

Query: 418 PQVAMATGQIYLQRFYYSKSFVRYPMETMAMGSIYLASKVEEKPCRIRDVINVFHHIKQV 597
           PQVAMATGQ+  QRF+YSKSFVR+ ME  AM  I LASK+EE P RIRDVINVFHHIKQV
Sbjct: 95  PQVAMATGQVLFQRFFYSKSFVRHSMEATAMSCICLASKIEEAPRRIRDVINVFHHIKQV 154

Query: 598 RAQKTISPMLVDQNYIELKNQVIKAERRILKELGFCVHVKHPHKLIVVYLQLLQYEKNRQ 777
           R+QK + PM++DQ+YI LK+QVIKAERR+LKELGFCVHVKHPHKLIV+YL+ L+ EK++ 
Sbjct: 155 RSQKPLLPMILDQHYINLKSQVIKAERRVLKELGFCVHVKHPHKLIVMYLKYLELEKHQN 214

Query: 778 LMQMAWNYXNDA 813
           +MQMAWN+ ND+
Sbjct: 215 MMQMAWNFMNDS 226



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 478 FVRYPMETMAMGSIYLASKVEEKP 549
           FVRY  ET+A   IYL ++    P
Sbjct: 232 FVRYQPETIACACIYLTARKHNIP 255


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score =  191 bits (465), Expect = 3e-50
 Identities = 97/153 (63%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
 Frame = +1

Query: 238 PAKLQKTYGKIVLTLYNCLLPESVFKETPSQADSLDIETETDLRILGCEMIQTAGILLRL 417
           P  +Q+ YGKIVLTL NCLLPE    +TPSQ D LD ETETDLRILGCE+IQTAGILL+L
Sbjct: 35  PQPVQRPYGKIVLTLENCLLPEVKLDQTPSQNDGLDRETETDLRILGCELIQTAGILLKL 94

Query: 418 PQVAMATGQIYLQRFYYSKSFVRYPMETMAMGSIYLASKVEEKPCRIRDVINVFHHIKQV 597
           PQVAMATGQ+  QRF+YSKSFVR+ ME  AM  I LASK+EE P RIRDVINVFHHIKQV
Sbjct: 95  PQVAMATGQVLFQRFFYSKSFVRHSMEATAMSCICLASKIEEAPRRIRDVINVFHHIKQV 154

Query: 598 RAQKTI-SPMLVDQNYIELKNQVIKAERRILKE 693
           R+Q  +       + Y+ LK  +     R+ K+
Sbjct: 155 RSQNFVGKTQSYSKLYLLLKATLSAQSFRVQKK 187


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -2

Query: 536 TLDAKYMLPIAIVSMGY 486
           TL  +Y+LPI IVSM Y
Sbjct: 217 TLCVQYVLPILIVSMAY 233


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 552 QNKRCNQRVSPHQTGQSTENNK 617
           +N   N R SP+Q   STENN+
Sbjct: 528 RNPSSNDR-SPNQNSDSTENNE 548


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,842
Number of Sequences: 2352
Number of extensions: 17689
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)