Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_I22
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D61380-1|BAA09603.2| 189|Homo sapiens DJ-1 protein protein. 165 1e-40
BC008188-1|AAH08188.1| 189|Homo sapiens Parkinson disease (auto... 165 1e-40
AL034417-1|CAB52550.1| 189|Homo sapiens Parkinson disease (auto... 165 1e-40
AF021819-1|AAC12806.1| 189|Homo sapiens RNA-binding protein reg... 165 1e-40
AB073864-1|BAB71782.1| 189|Homo sapiens DJ-1 protein. 165 1e-40
AY648999-1|AAT68961.1| 52|Homo sapiens DJ-1 protein. 50 1e-05
>D61380-1|BAA09603.2| 189|Homo sapiens DJ-1 protein protein.
Length = 189
Score = 165 bits (401), Expect = 1e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +1
Query: 40 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 219
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 220 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 399
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KEGP-YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 400 RVTSYPSTRDKL-SAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 576
+VT++P +DK+ + G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSEN-RVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 577 VEKGMLI 597
V+ +++
Sbjct: 181 VKAPLVL 187
>BC008188-1|AAH08188.1| 189|Homo sapiens Parkinson disease
(autosomal recessive, early onset) 7 protein.
Length = 189
Score = 165 bits (401), Expect = 1e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +1
Query: 40 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 219
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 220 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 399
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KEGP-YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 400 RVTSYPSTRDKL-SAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 576
+VT++P +DK+ + G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSEN-RVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 577 VEKGMLI 597
V+ +++
Sbjct: 181 VKAPLVL 187
>AL034417-1|CAB52550.1| 189|Homo sapiens Parkinson disease
(autosomal recessive, early onset) 7 protein.
Length = 189
Score = 165 bits (401), Expect = 1e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +1
Query: 40 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 219
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 220 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 399
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KEGP-YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 400 RVTSYPSTRDKL-SAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 576
+VT++P +DK+ + G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSEN-RVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 577 VEKGMLI 597
V+ +++
Sbjct: 181 VKAPLVL 187
>AF021819-1|AAC12806.1| 189|Homo sapiens RNA-binding protein
regulatory subunit protein.
Length = 189
Score = 165 bits (401), Expect = 1e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +1
Query: 40 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 219
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 220 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 399
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KEGP-YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 400 RVTSYPSTRDKL-SAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 576
+VT++P +DK+ + G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSEN-RVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 577 VEKGMLI 597
V+ +++
Sbjct: 181 VKAPLVL 187
>AB073864-1|BAB71782.1| 189|Homo sapiens DJ-1 protein.
Length = 189
Score = 165 bits (401), Expect = 1e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +1
Query: 40 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 219
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 220 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 399
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KEGP-YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGCGS 121
Query: 400 RVTSYPSTRDKL-SAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 576
+VT++P +DK+ + G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSEN-RVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 577 VEKGMLI 597
V+ +++
Sbjct: 181 VKAPLVL 187
>AY648999-1|AAT68961.1| 52|Homo sapiens DJ-1 protein.
Length = 52
Score = 49.6 bits (113), Expect = 1e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +1
Query: 448 YTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQVEKGMLI 597
YTY E RV D ++TSRGPGT++ F L ++E L GKE A QV+ +++
Sbjct: 2 YTYSEN-RVEKDSLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.131 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,959,070
Number of Sequences: 237096
Number of extensions: 1645480
Number of successful extensions: 2509
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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