BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_I21
(542 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071277-1|AAL48899.1| 155|Drosophila melanogaster RE30690p pro... 136 2e-32
AE014134-2347|AAF53299.1| 155|Drosophila melanogaster CG9282-PA... 136 2e-32
AY071693-1|AAL49315.1| 123|Drosophila melanogaster RH14088p pro... 77 2e-14
AY113325-1|AAM29330.1| 191|Drosophila melanogaster AT28833p pro... 56 2e-08
AE014297-1297|AAF54637.1| 191|Drosophila melanogaster CG6764-PA... 56 2e-08
>AY071277-1|AAL48899.1| 155|Drosophila melanogaster RE30690p
protein.
Length = 155
Score = 136 bits (328), Expect = 2e-32
Identities = 63/100 (63%), Positives = 74/100 (74%)
Frame = +3
Query: 27 MNLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 206
M +GLCA G K PGHGK MVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +
Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60
Query: 207 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 326
KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 61 KGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100
>AE014134-2347|AAF53299.1| 155|Drosophila melanogaster CG9282-PA
protein.
Length = 155
Score = 136 bits (328), Expect = 2e-32
Identities = 63/100 (63%), Positives = 74/100 (74%)
Frame = +3
Query: 27 MNLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 206
M +GLCA G K PGHGK MVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +
Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60
Query: 207 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 326
KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 61 KGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100
>AY071693-1|AAL49315.1| 123|Drosophila melanogaster RH14088p
protein.
Length = 123
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +3
Query: 150 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 326
M+RNPRKVTWTVLYRRK +KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>AY113325-1|AAM29330.1| 191|Drosophila melanogaster AT28833p
protein.
Length = 191
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = +3
Query: 27 MNLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 197
M + C SK PGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>AE014297-1297|AAF54637.1| 191|Drosophila melanogaster CG6764-PA
protein.
Length = 191
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = +3
Query: 27 MNLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 197
M + C SK PGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,661,842
Number of Sequences: 53049
Number of extensions: 321735
Number of successful extensions: 501
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -